Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 7
- extracellular 5
- vacuole 4
- plasma membrane 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX88935 | Canola | plasma membrane | 86.78 | 87.27 |
Bra006462.1-P | Field mustard | plasma membrane | 86.41 | 86.73 |
CDX70822 | Canola | plasma membrane | 85.47 | 86.28 |
CDY58112 | Canola | plasma membrane | 84.17 | 85.28 |
CDY02625 | Canola | plasma membrane | 84.36 | 84.99 |
Bra023678.1-P | Field mustard | plasma membrane | 83.43 | 84.05 |
VIT_14s0036g00430.t01 | Wine grape | golgi | 67.78 | 66.67 |
Solyc04g009920.2.1 | Tomato | golgi | 65.74 | 66.23 |
PGSC0003DMT400029873 | Potato | plasma membrane | 65.36 | 65.85 |
KRG92718 | Soybean | endoplasmic reticulum | 66.29 | 65.8 |
KRH68773 | Soybean | endoplasmic reticulum | 66.29 | 64.61 |
KRG97021 | Soybean | endoplasmic reticulum | 66.29 | 64.61 |
Solyc05g055040.2.1 | Tomato | plasma membrane | 64.06 | 64.54 |
PGSC0003DMT400060425 | Potato | plasma membrane | 63.87 | 64.35 |
GSMUA_Achr11P... | Banana | plasma membrane | 62.57 | 62.57 |
GSMUA_Achr5P18580_001 | Banana | plasma membrane | 63.69 | 62.52 |
KRH34122 | Soybean | plasma membrane | 58.66 | 61.05 |
Zm00001d025865_P001 | Maize | plasma membrane | 59.03 | 59.14 |
EES11117 | Sorghum | plasma membrane | 58.85 | 58.96 |
HORVU2Hr1G089320.8 | Barley | cytosol | 52.7 | 58.84 |
TraesCS2A01G381700.1 | Wheat | plasma membrane | 58.66 | 58.23 |
TraesCS2B01G399000.1 | Wheat | plasma membrane | 58.29 | 57.96 |
TraesCS2D01G378200.1 | Wheat | plasma membrane | 58.1 | 57.78 |
TraesCS6B01G257400.2 | Wheat | plasma membrane | 51.58 | 57.71 |
Os02t0624400-01 | Rice | golgi | 58.29 | 57.22 |
TraesCS6D01G211500.1 | Wheat | plasma membrane | 57.36 | 56.93 |
TraesCS6A01G223900.1 | Wheat | plasma membrane | 56.61 | 56.19 |
HORVU6Hr1G058670.11 | Barley | endoplasmic reticulum, golgi | 43.39 | 53.81 |
Os04t0517400-01 | Rice | cytosol, plasma membrane | 25.51 | 46.28 |
AT4G16600.1 | Thale cress | plasma membrane | 18.62 | 20.24 |
AT2G35710.1 | Thale cress | plasma membrane | 16.95 | 18.31 |
AT1G08990.1 | Thale cress | golgi | 18.81 | 17.84 |
AT1G54940.1 | Thale cress | golgi | 17.13 | 16.52 |
AT1G77130.1 | Thale cress | golgi | 18.81 | 16.34 |
AT3G18660.2 | Thale cress | plastid | 18.06 | 14.72 |
AT4G33330.2 | Thale cress | endoplasmic reticulum, golgi, plastid | 16.39 | 14.06 |
Protein Annotations
Gene3D:3.90.550.10 | MapMan:5.4.13.2 | EntrezGene:831966 | UniProt:A0A178USM2 | EMBL:AC051626 | ProteinID:AED92569.1 |
EMBL:AF462795 | EMBL:AK118951 | ArrayExpress:AT5G18480 | EnsemblPlantsGene:AT5G18480 | RefSeq:AT5G18480 | TAIR:AT5G18480 |
RefSeq:AT5G18480-TAIR-G | EnsemblPlants:AT5G18480.1 | TAIR:AT5G18480.1 | EMBL:AY143921 | Unigene:At.31418 | ncoils:Coil |
GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006629 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015020 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046513 | GO:GO:0046872 | GO:GO:1990482 |
InterPro:Glyco_trans_8 | InterPro:IPR029044 | EMBL:KJ138680 | RefSeq:NP_197349.2 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAO95701.1 |
PFAM:PF01501 | Symbol:PGSIP6 | PO:PO:0000293 | PO:PO:0009025 | PANTHER:PTHR11183 | PANTHER:PTHR11183:SF65 |
UniProt:Q8GWB7 | SUPFAM:SSF53448 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000ADFDF | SEG:seg |
Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
Coordinates
chr5:-:6131130..6133982
Molecular Weight (calculated)
60014.3 Da
IEP (calculated)
9.138
GRAVY (calculated)
0.205
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.