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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 7
  • extracellular 5
  • vacuole 4
  • plasma membrane 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88935 Canola plasma membrane 86.78 87.27
Bra006462.1-P Field mustard plasma membrane 86.41 86.73
CDX70822 Canola plasma membrane 85.47 86.28
CDY58112 Canola plasma membrane 84.17 85.28
CDY02625 Canola plasma membrane 84.36 84.99
Bra023678.1-P Field mustard plasma membrane 83.43 84.05
VIT_14s0036g00430.t01 Wine grape golgi 67.78 66.67
Solyc04g009920.2.1 Tomato golgi 65.74 66.23
PGSC0003DMT400029873 Potato plasma membrane 65.36 65.85
KRG92718 Soybean endoplasmic reticulum 66.29 65.8
KRH68773 Soybean endoplasmic reticulum 66.29 64.61
KRG97021 Soybean endoplasmic reticulum 66.29 64.61
Solyc05g055040.2.1 Tomato plasma membrane 64.06 64.54
PGSC0003DMT400060425 Potato plasma membrane 63.87 64.35
GSMUA_Achr11P... Banana plasma membrane 62.57 62.57
GSMUA_Achr5P18580_001 Banana plasma membrane 63.69 62.52
KRH34122 Soybean plasma membrane 58.66 61.05
Zm00001d025865_P001 Maize plasma membrane 59.03 59.14
EES11117 Sorghum plasma membrane 58.85 58.96
HORVU2Hr1G089320.8 Barley cytosol 52.7 58.84
TraesCS2A01G381700.1 Wheat plasma membrane 58.66 58.23
TraesCS2B01G399000.1 Wheat plasma membrane 58.29 57.96
TraesCS2D01G378200.1 Wheat plasma membrane 58.1 57.78
TraesCS6B01G257400.2 Wheat plasma membrane 51.58 57.71
Os02t0624400-01 Rice golgi 58.29 57.22
TraesCS6D01G211500.1 Wheat plasma membrane 57.36 56.93
TraesCS6A01G223900.1 Wheat plasma membrane 56.61 56.19
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 43.39 53.81
Os04t0517400-01 Rice cytosol, plasma membrane 25.51 46.28
AT4G16600.1 Thale cress plasma membrane 18.62 20.24
AT2G35710.1 Thale cress plasma membrane 16.95 18.31
AT1G08990.1 Thale cress golgi 18.81 17.84
AT1G54940.1 Thale cress golgi 17.13 16.52
AT1G77130.1 Thale cress golgi 18.81 16.34
AT3G18660.2 Thale cress plastid 18.06 14.72
AT4G33330.2 Thale cress endoplasmic reticulum, golgi, plastid 16.39 14.06
Protein Annotations
Gene3D:3.90.550.10MapMan:5.4.13.2EntrezGene:831966UniProt:A0A178USM2EMBL:AC051626ProteinID:AED92569.1
EMBL:AF462795EMBL:AK118951ArrayExpress:AT5G18480EnsemblPlantsGene:AT5G18480RefSeq:AT5G18480TAIR:AT5G18480
RefSeq:AT5G18480-TAIR-GEnsemblPlants:AT5G18480.1TAIR:AT5G18480.1EMBL:AY143921Unigene:At.31418ncoils:Coil
GO:GO:0000139GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015020GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016757GO:GO:0046513GO:GO:0046872GO:GO:1990482
InterPro:Glyco_trans_8InterPro:IPR029044EMBL:KJ138680RefSeq:NP_197349.2InterPro:Nucleotide-diphossugar_transProteinID:OAO95701.1
PFAM:PF01501Symbol:PGSIP6PO:PO:0000293PO:PO:0009025PANTHER:PTHR11183PANTHER:PTHR11183:SF65
UniProt:Q8GWB7SUPFAM:SSF53448SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000ADFDFSEG:seg
Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
Coordinates
chr5:-:6131130..6133982
Molecular Weight (calculated)
60014.3 Da
IEP (calculated)
9.138
GRAVY (calculated)
0.205
Length
537 amino acids
Sequence
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.