Factsheet for AT1G54940.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95254	Canola	golgi	80.07	80.07
Bra027954.1-P	Field mustard	golgi	77.92	79.78
CDY41730	Canola	endoplasmic reticulum, golgi	79.71	79.71
AT1G08990.1	Thale cress	golgi	69.84	68.73
VIT_14s0128g00420.t01	Wine grape	golgi	52.96	54.03
PGSC0003DMT400048888	Potato	nucleus	45.78	50.6
KRG96838	Soybean	golgi	49.73	50.09
Solyc01g098960.1.1	Tomato	golgi	47.58	47.75
KRH33949	Soybean	plastid	48.65	47.29
Solyc01g098970.1.1	Tomato	golgi	46.14	46.56
PGSC0003DMT400048884	Potato	golgi	45.78	45.95
KRH68559	Soybean	cytosol	29.26	45.92
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	43.63	38.82
AT1G77130.1	Thale cress	golgi	38.24	34.47
AT3G18660.2	Thale cress	plastid	40.04	33.84
AT5G18480.1	Thale cress	golgi	16.52	17.13
AT2G35710.1	Thale cress	plasma membrane	11.85	13.28
AT4G16600.1	Thale cress	plasma membrane	11.49	12.96

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EntrezGene:841934	UniProt:A0A178W326	ProteinID:AAG00875.1	ProteinID:AAG51129.1
ProteinID:AEE33165.1	ArrayExpress:AT1G54940	EnsemblPlantsGene:AT1G54940	RefSeq:AT1G54940	TAIR:AT1G54940	RefSeq:AT1G54940-TAIR-G
EnsemblPlants:AT1G54940.1	TAIR:AT1G54940.1	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0008150
GO:GO:0009987	GO:GO:0015020	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016757	GO:GO:0046872	GO:GO:0071555	InterPro:Glyco_trans_8	InterPro:IPR029044	EMBL:KJ138962
RefSeq:NP_175891.1	InterPro:Nucleotide-diphossugar_trans	ProteinID:OAP11945.1	PFAM:PF01501	Symbol:PGSIP4	PO:PO:0000084
PO:PO:0007611	PO:PO:0009005	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022
PANTHER:PTHR11183	PANTHER:PTHR11183:SF51	UniProt:Q9FZ37	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000004839D
UniProt:W8PV93	SEG:seg	:	:	:	:

Description

GUX4Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ37]

Coordinates

chr1:+:20481648..20484799

Molecular Weight (calculated)

64712.2 Da

IEP (calculated)

9.404

GRAVY (calculated)

-0.374

Length

557 amino acids

Sequence
(BLAST)

001: MGTKTHNSRG KIFMIYLILV SLSLLGLILP FKPLFRITSP SSTLRIDLPS PQVNKNPKWL RLIRNYLPEK RIQVGFLNID EKERESYEAR GPLVLKNIHV
101: PLDHIPKNVT WKSLYPEWIN EEASTCPEIP LPQPEGSDAN VDVIVARVPC DGWSANKGLR DVFRLQVNLA AANLAVQSGL RTVNQAVYVV FIGSCGPMHE
201: IFPCDERVMR VEDYWVYKPY LPRLKQKLLM PVGSCQIAPS FAQFGQEAWR PKHEDNLASK AVTALPRRLR VAYVTVLHSS EAYVCGAIAL AQSIRQSGSH
301: KDMILLHDHT ITNKSLIGLS AAGWNLRLID RIRSPFSQKD SYNEWNYSKL RVWQVTDYDK LVFIDADFII LKKLDHLFYY PQLSASGNDK VLFNSGIMVL
401: EPSACMFKDL MEKSFKIESY NGGDQGFLNE IFVWWHRLSK RVNTMKYFDE KNHRRHDLPE NVEGLHYLGL KPWVCYRDYD CNWDISERRV FASDSVHEKW
501: WKVYDKMSEQ LKGYCGLNKN MEKRIEKWRR IAKNNSLPDR HWEIEVRDPR KTNLLVQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.