Factsheet for PGSC0003DMT400048888

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g098960.1.1	Tomato	golgi	93.85	85.23
VIT_14s0128g00420.t01	Wine grape	golgi	58.13	53.66
PGSC0003DMT400048884	Potato	golgi	58.73	53.33
KRG96838	Soybean	golgi	55.75	50.81
KRH68559	Soybean	cytosol	34.72	49.3
Bra031653.1-P	Field mustard	cytosol	50.2	47.92
Bra027954.1-P	Field mustard	golgi	51.39	47.61
Bra030750.1-P	Field mustard	plastid	49.4	47.34
KRH33949	Soybean	plastid	53.57	47.12
CDY41730	Canola	endoplasmic reticulum, golgi	51.39	46.5
CDX95254	Canola	golgi	51.19	46.32
AT1G54940.1	Thale cress	golgi	50.6	45.78
AT1G08990.1	Thale cress	golgi	50.0	44.52
CDY31118	Canola	golgi	50.0	44.37
CDY22652	Canola	golgi	49.6	44.09
CDY06343	Canola	golgi	47.82	43.9
CDY32143	Canola	golgi	49.4	43.84
CDY32144	Canola	endoplasmic reticulum, golgi	48.21	43.39
PGSC0003DMT400020680	Potato	golgi	47.22	41.11
PGSC0003DMT400020678	Potato	golgi	45.83	40.96
PGSC0003DMT400063796	Potato	golgi	43.85	34.1
PGSC0003DMT400060425	Potato	plasma membrane	17.66	16.7
PGSC0003DMT400029873	Potato	plasma membrane	16.87	15.95
PGSC0003DMT400030982	Potato	plasma membrane	12.9	13.98
PGSC0003DMT400012126	Potato	plasma membrane	12.7	13.45

Protein Annotations

EnsemblPlants:PGSC0003DMT400048888	EnsemblPlantsGene:PGSC0003DMG400018997	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF51
PFAM:PF01501	PGSC:PGSC0003DMG400018997	SEG:seg	SUPFAM:SSF53448	UniParc:UPI000295628D	UniProt:M1BMZ9
MapMan:21.2.2.1.2.1	:	:	:	:	:

Description

Glycosyl transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400018997]

Coordinates

chr1:+:76585268..76587117

Molecular Weight (calculated)

58982.9 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.415

Length

504 amino acids

Sequence
(BLAST)

001: MPMEHFTSKP QWFQLLQDEI KDKSTLKIGL VNLDDVSFFD YVGLHGAKNM ETFDVKFPKV SNKIKWKDLF PEWIDEKELS AKPTCPEIPM PVFEVYEELD
101: VVVAKVPCKH VGVDGSRDVL RLQVNLVVAN LLVSGGWNKN RPVYAVFIGD CGPMWEIFRC EDMLLHEENL WVYKPELKKL KQKILMPVGS CQLARPFSEQ
201: EQESWKSYPA STLDKTFHKK PREAYVTVIH SSEAYVCGAI ALAQSIILTN STRDLVLLAD DSISPKSLYG LRAAGWKIKK IKRIRSPHAP KNAYNEWNYS
301: KLRIWQLIEY DKVIFIDSDF VVFRNIDQFF SYPELSAAGN DGYIFNSGVM IIEPSKCKFQ NLMNKRFEVS SYNGGDQGFL NEMFVWWHRW PTKLNTLKIF
401: INSNHRDLPD DSYTVHYLGL KPWLCYEDYD CNWDKVESQI FASDSAHERW WKVYKKMSME LREYCALTPQ MDARIIKWRR KAKKANFSDG HWRIQVKDPR
501: RLSN

Best Arabidopsis Sequence Match ( AT1G54940.1 )
(BLAST)

001: MGTKTHNSRG KIFMIYLILV SLSLLGLILP FKPLFRITSP SSTLRIDLPS PQVNKNPKWL RLIRNYLPEK RIQVGFLNID EKERESYEAR GPLVLKNIHV
101: PLDHIPKNVT WKSLYPEWIN EEASTCPEIP LPQPEGSDAN VDVIVARVPC DGWSANKGLR DVFRLQVNLA AANLAVQSGL RTVNQAVYVV FIGSCGPMHE
201: IFPCDERVMR VEDYWVYKPY LPRLKQKLLM PVGSCQIAPS FAQFGQEAWR PKHEDNLASK AVTALPRRLR VAYVTVLHSS EAYVCGAIAL AQSIRQSGSH
301: KDMILLHDHT ITNKSLIGLS AAGWNLRLID RIRSPFSQKD SYNEWNYSKL RVWQVTDYDK LVFIDADFII LKKLDHLFYY PQLSASGNDK VLFNSGIMVL
401: EPSACMFKDL MEKSFKIESY NGGDQGFLNE IFVWWHRLSK RVNTMKYFDE KNHRRHDLPE NVEGLHYLGL KPWVCYRDYD CNWDISERRV FASDSVHEKW
501: WKVYDKMSEQ LKGYCGLNKN MEKRIEKWRR IAKNNSLPDR HWEIEVRDPR KTNLLVQ

Arabidopsis Description

GUX4Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ37]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.