CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030750.1-P	Field mustard	plastid	90.85	98.1
CDY31118	Canola	golgi	96.65	96.65
CDY32144	Canola	endoplasmic reticulum, golgi	85.21	86.43
CDY22652	Canola	golgi	82.57	82.72
AT1G08990.1	Thale cress	golgi	80.46	80.74
CDY06343	Canola	golgi	77.82	80.51
CDY41730	Canola	endoplasmic reticulum, golgi	66.55	67.86
CDX95254	Canola	golgi	65.85	67.15
VIT_14s0128g00420.t01	Wine grape	golgi	49.82	51.83
PGSC0003DMT400048888	Potato	nucleus	43.84	49.4
KRG96838	Soybean	golgi	46.83	48.1
KRH33949	Soybean	plastid	46.48	46.07
KRH68559	Soybean	cytosol	28.52	45.63
Solyc01g098960.1.1	Tomato	golgi	44.54	45.59
Solyc01g098970.1.1	Tomato	golgi	43.84	45.11
PGSC0003DMT400048884	Potato	golgi	43.49	44.5
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	42.96	41.22
CDX75345	Canola	golgi, plastid	43.49	40.96
CDX68968	Canola	golgi	43.49	40.76
CDY04633	Canola	golgi, mitochondrion, peroxisome	38.56	34.27
CDY38364	Canola	extracellular, golgi	33.45	34.23
CDY13574	Canola	plastid	27.64	33.91
CDX96589	Canola	golgi, peroxisome, plasma membrane	36.44	33.5
CDX99330	Canola	cytosol	8.45	33.33
CDY18535	Canola	plastid	38.56	33.18
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	35.92	33.06
CDY53768	Canola	plastid	38.2	32.88
CDX92257	Canola	plastid	34.68	31.32
CDY28291	Canola	nucleus	10.74	26.41
CDY28292	Canola	golgi	34.15	26.25
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	38.56	21.16
CDY58112	Canola	plasma membrane	16.55	17.74
CDY02625	Canola	plasma membrane	16.02	17.07
CDX88935	Canola	plasma membrane	16.02	17.04
CDX70822	Canola	plasma membrane	15.67	16.73
CDY29996	Canola	extracellular, plasma membrane	15.67	16.3
CDY21129	Canola	extracellular, golgi, plasma membrane	15.32	15.93
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	10.56	14.05
CDY32093	Canola	cytosol	10.21	13.49
CDX84174	Canola	plasma membrane	11.44	13.16
CDY40445	Canola	plasma membrane	11.27	12.96
CDY40528	Canola	plasma membrane	9.86	10.09

Protein Annotations

EnsemblPlants:CDY32143	EnsemblPlantsGene:GSBRNA2T00051515001	Gene3D:3.90.550.10	GO:A0A078H5Q7	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF51	ProteinID:CDY32143
ProteinID:CDY32143.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0004EE1AD8	UniProt:A0A078H5Q7
MapMan:21.2.2.1.2.1	:	:	:	:	:

Description

BnaCnng06520DBnaCnng06520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5Q7]

Coordinates

chrLK032288:+:82267..86547

Molecular Weight (calculated)

66011.9 Da

IEP (calculated)

9.896

GRAVY (calculated)

-0.379

Length

568 amino acids

Sequence
(BLAST)

001: MGSKNKNSSK RFFMFYLMLT SLSFLGLILR FKPLFLLNPM ITSPSIIEIH YSLPVVPVNR NPRWLRLIKN FLPDQKKIRV GLLNIAENER ESYEATGTSI
101: LENVHVLLDP LPKNLTWESL FPVWIDEDHT WNAPVCPEVP LPQVEGTAAD VDVVVVKTPC DGFSESKGLR DVFRLQVNLA AAKLVVESGR RNVDRTVYVV
201: FIGSCEPMHE IFRCDERVRR VGKYWVYRPN LKKLKQKLLM PVGSCQIAPP VTELDQETWR RQKNESLSST TTLSSFPAQR VAYVTLLHSS ESYVCGAIAL
301: AQSIRQSGSR HDMILLHDDS IKNKSRIGLS LAGWKLRRVE RISSPFSEKG SYNEWNYSKL RVWQATDYDK LVFIDADFII AKNVDYLFFY PQLSAAGNNR
401: VLFNSGVMVL EPSACLFEEL MQQSFKIKSY NGGDQGFLNE YFVWWHRLSK RVNTMKYFGE ETNIGPKRNL PDNLEGIHYL GIKPWRCYRD YDCNWDLTTR
501: RVYASESVNK KWWKVYDKMP KKLQRYCGLT RKMDKNIEKW MKAAKVKGFP EKHWRLQVGD PRKRNLVD

Best Arabidopsis Sequence Match ( AT1G08990.1 )
(BLAST)

001: MGAKSKSSST RFFMFYLILI SLSFLGLLLN FKPLFLLNPM IASPSIVEIR YSLPEPVKRT PIWLRLIRNY LPDEKKIRVG LLNIAENERE SYEASGTSIL
101: ENVHVSLDPL PNNLTWTSLF PVWIDEDHTW HIPSCPEVPL PKMEGSEADV DVVVVKVPCD GFSEKRGLRD VFRLQVNLAA ANLVVESGRR NVDRTVYVVF
201: IGSCGPMHEI FRCDERVKRV GDYWVYRPDL TRLKQKLLMP PGSCQIAPLG QGEAWIQDKN RNLTSEKTTL SSFTAQRVAY VTLLHSSEVY VCGAIALAQS
301: IRQSGSTKDM ILLHDDSITN ISLIGLSLAG WKLRRVERIR SPFSKKRSYN EWNYSKLRVW QVTDYDKLVF IDADFIIVKN IDYLFSYPQL SAAGNNKVLF
401: NSGVMVLEPS ACLFEDLMLK SFKIGSYNGG DQGFLNEYFV WWHRLSKRLN TMKYFGDESR HDKARNLPEN LEGIHYLGLK PWRCYRDYDC NWDLKTRRVY
501: ASESVHARWW KVYDKMPKKL KGYCGLNLKM EKNVEKWRKM AKLNGFPENH WKIRIKDPRK KNRLSQ

Arabidopsis Description

GUX5Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:F4HZC3]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.