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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid, vacuole
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:vacuole
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037570.1-P Field mustard plastid 98.94 98.94
CDY53768 Canola plastid 97.42 97.42
AT3G18660.2 Thale cress plastid 92.12 92.26
CDX92257 Canola plastid 86.21 90.46
HORVU0Hr1G000670.2 Barley cytosol 43.03 71.36
Os05t0426400-01 Rice mitochondrion 38.64 71.23
Solyc11g005760.1.1 Tomato cytosol 60.0 69.6
KRH53878 Soybean cytosol, golgi, mitochondrion 66.52 68.7
VIT_04s0044g00990.t01 Wine grape golgi 66.06 68.55
KRH64070 Soybean plastid 65.91 68.08
KRH59555 Soybean cytosol 64.85 66.88
CDY04633 Canola golgi, mitochondrion, peroxisome 59.09 61.03
Os01t0880200-01 Rice cytosol, golgi, peroxisome 58.48 60.79
KRH57436 Soybean cytosol 54.55 60.61
HORVU3Hr1G091400.3 Barley golgi 58.03 60.51
TraesCS3D01G404100.1 Wheat golgi 58.03 60.41
TraesCS3A01G409200.2 Wheat golgi 57.88 60.25
EES01856 Sorghum golgi 57.73 60.19
TraesCS3B01G442700.1 Wheat golgi 57.73 60.09
CDX99330 Canola cytosol 13.03 59.72
Zm00001d042627_P005 Maize golgi 57.58 59.56
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 55.61 59.48
CDX96589 Canola golgi, peroxisome, plasma membrane 55.61 59.39
Zm00001d012224_P001 Maize golgi 57.58 59.28
EES19558 Sorghum golgi 56.67 59.27
HORVU1Hr1G065560.2 Barley golgi 56.21 59.08
Zm00001d038229_P001 Maize plasma membrane 56.52 59.02
TraesCS1B01G277500.1 Wheat cytosol, golgi, peroxisome 56.21 58.89
TraesCS1D01G266700.2 Wheat cytosol, golgi, peroxisome 56.06 58.73
HORVU0Hr1G000650.2 Barley golgi 56.06 58.64
TraesCS1A01G266600.2 Wheat cytosol, golgi, peroxisome 55.91 58.48
GSMUA_Achr3P16530_001 Banana plastid 50.76 57.56
CDY38364 Canola extracellular, golgi 48.03 57.12
GSMUA_Achr7P23420_001 Banana cytosol, plastid 44.24 55.83
GSMUA_Achr6P18570_001 Banana plastid 44.24 55.62
CDY13574 Canola plastid 38.48 54.86
GSMUA_Achr4P16410_001 Banana endoplasmic reticulum, golgi 46.52 54.53
GSMUA_Achr8P29450_001 Banana plasma membrane 51.06 54.35
GSMUA_Achr7P03050_001 Banana endoplasmic reticulum 47.58 54.23
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 46.82 53.28
GSMUA_Achr10P... Banana golgi 42.58 51.47
GSMUA_Achr8P32660_001 Banana plastid 53.03 51.32
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 38.94 43.41
CDX75345 Canola golgi, plastid 38.94 42.62
CDX68968 Canola golgi 39.09 42.57
CDY41730 Canola endoplasmic reticulum, golgi 34.09 40.4
CDX95254 Canola golgi 33.94 40.22
CDY32144 Canola endoplasmic reticulum, golgi 33.79 39.82
CDY22652 Canola golgi 33.48 38.98
CDY32143 Canola golgi 33.18 38.56
CDY31118 Canola golgi 33.03 38.38
CDY06343 Canola golgi 31.36 37.7
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 58.94 37.58
CDY28291 Canola nucleus 11.36 32.47
CDY28292 Canola golgi 29.85 26.66
CDY58112 Canola plasma membrane 15.0 18.68
CDY02625 Canola plasma membrane 14.7 18.2
CDX88935 Canola plasma membrane 13.94 17.23
CDX70822 Canola plasma membrane 13.79 17.11
CDY29996 Canola extracellular, plasma membrane 13.79 16.67
CDY21129 Canola extracellular, golgi, plasma membrane 13.48 16.3
CDY40445 Canola plasma membrane 11.67 15.59
CDX84174 Canola plasma membrane 11.36 15.18
CDY32093 Canola cytosol 9.55 14.65
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 9.09 14.05
CDY40528 Canola plasma membrane 8.33 9.91
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-MapMan:21.2.2.1.2.1Gene3D:3.90.550.10GO:A0A078FVW1
UniProt:A0A078FVW1EnsemblPlants:CDY18535ProteinID:CDY18535ProteinID:CDY18535.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009834GO:GO:0009987GO:GO:0015020
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00005561001
InterPro:GUXInterPro:Glyco_trans_8InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183
PANTHER:PTHR11183:SF45SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EF14A7SEG:seg:
Description
BnaA01g26600DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078FVW1]
Coordinates
chrLK032086:-:342193..346026
Molecular Weight (calculated)
76355.1 Da
IEP (calculated)
8.009
GRAVY (calculated)
-0.428
Length
660 amino acids
Sequence
(BLAST)
001: MANPPAATAA TAATGGDSRR RLSASIEAIC KRRFRRNSKG GGRQDMVKPF NIINFQTGDK NSNCCCSKFQ MVKVLLFILL LATLFTIIYS PEVYHHSLSH
101: SSSRWIWRRQ DSRYVSDLDI NWDDVTKTLE SVQEGRTIGV LNFNSNEIQR WRELAKTKDN EEEENVVVLD LDYADKNVTW ESLYPEWIDE EQETEVPVCP
201: DLPKIKVPTR RLDLIVVKLP CRKEGNWSRD VGRLHLQLAA ATVAAAAKGF FRGHVLFVSR CFPIPNLFRC KDLVARRGDV WLYKPNLDTL RDKLQLPIGS
301: CELSLPLGIK ERPSLGNPKR EAYATILHSA HVYVCGAIAA AQSIRQSGST RDLVILVDDN ISGYHRSGLE AAGWQIRTIQ RIRNPKAEKD AYNEWNYSKF
401: RLWQLTDYDK IIFIDADLLI LRNIDFLFSM PEISATGNNG TLFNSGVMVI EPCNCTFELL MEHINEIESY NGGDQGYLNE VFTWWHRIPK HMNFLKHFWV
501: GDEDDVRRKK TELFGAEPPI LYVLHYLGMK PWLCYRDYDC NFNSDIFVEF ATDIAHRRWW MVHDAMPKEL HQFCYLRSKQ KAQLEYDRRQ AEAANYTDGH
601: WKIRVKDPRF KTCIDKLCNW KSMLRHWGES NSNWTDDESF VPTPPAITAV RRSSLPGHNL
Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)
001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL
Arabidopsis Description
GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.