CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 2
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012224_P001	Maize	golgi	96.68	95.48
Zm00001d042627_P005	Maize	golgi	95.58	94.83
HORVU3Hr1G091400.3	Barley	golgi	89.42	89.42
TraesCS3D01G404100.1	Wheat	golgi	89.26	89.12
TraesCS3A01G409200.2	Wheat	golgi	89.26	89.12
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	89.26	88.98
TraesCS3B01G442700.1	Wheat	golgi	89.1	88.96
EES19558	Sorghum	golgi	80.57	80.82
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	66.67	65.73
Solyc11g005760.1.1	Tomato	cytosol	57.66	64.15
VIT_04s0044g00990.t01	Wine grape	golgi	63.98	63.68
KRH15962	Soybean	golgi	59.4	63.62
KRH53878	Soybean	cytosol, golgi, mitochondrion	64.14	63.54
KRH64070	Soybean	plastid	63.82	63.22
PGSC0003DMT400063796	Potato	golgi	64.45	62.96
Solyc04g064790.2.1	Tomato	golgi	64.3	62.81
KRH72868	Soybean	golgi	63.51	62.42
GSMUA_Achr3P16530_001	Banana	plastid	57.03	62.03
KRH59555	Soybean	cytosol	61.93	61.25
CDY04633	Canola	golgi, mitochondrion, peroxisome	60.66	60.09
AT1G77130.1	Thale cress	golgi	58.61	60.03
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	58.14	59.64
CDX96589	Canola	golgi, peroxisome, plasma membrane	58.14	59.55
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	57.82	59.51
GSMUA_Achr8P29450_001	Banana	plasma membrane	57.82	59.03
Bra037570.1-P	Field mustard	plastid	60.19	57.73
CDY18535	Canola	plastid	60.19	57.73
CDY53768	Canola	plastid	59.87	57.42
AT3G18660.2	Thale cress	plastid	59.24	56.9
KRH57436	Soybean	cytosol	52.92	56.4
Bra008292.1-P	Field mustard	extracellular, plasma membrane	49.29	56.22
CDX92257	Canola	plastid	55.61	55.96
Bra022342.1-P	Field mustard	plastid	55.61	55.87
CDY38364	Canola	extracellular, golgi	48.97	55.86
CDY13574	Canola	plastid	36.81	50.32
KXG30414	Sorghum	mitochondrion	49.76	48.09
EES03905	Sorghum	golgi	44.23	44.52
EER95378	Sorghum	golgi, plastid	40.92	42.81
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	60.51	37.0
Bra017919.1-P	Field mustard	cytosol	60.19	36.95
EES11117	Sorghum	plasma membrane	15.64	18.47
OQU92160	Sorghum	golgi, mitochondrion	11.69	15.23
OQU82100	Sorghum	plasma membrane	9.95	14.72

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EntrezGene:8063129	UniProt:C5XRE4	EnsemblPlants:EES01856	ProteinID:EES01856
ProteinID:EES01856.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501
PANTHER:PTHR11183	PANTHER:PTHR11183:SF91	EnsemblPlantsGene:SORBI_3003G376700	SUPFAM:SSF53448	unigene:Sbi.1952	TMHMM:TMhelix
UniParc:UPI0001A84FB6	RefSeq:XP_002456736.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:69118080..69123671

Molecular Weight (calculated)

73001.9 Da

IEP (calculated)

8.457

GRAVY (calculated)

-0.393

Length

633 amino acids

Sequence
(BLAST)

001: MGSLEARYRP AGAAEDTAKR RTQKSKSFKE VEKFDVFVLE KSSGCKFRSL QLLLFAIMSA AFLTLLYTPS VYEHQLQSSS RLVNGWIWDK RSSDPRYVSS
101: ASIQWEDVYK SIQNLNVGEQ KLSVGLLNFN RTEFGAWTHM LPESDFSIIR LEHANESITW QTLYPEWIDE EEETEIPSCP SLPDPSFPRA THFDVVAVKL
201: PCSRVAGWSR DVARLHLQLS AAKLAAATTR GNSGIHVLFV TDCFPIPNLF SCKDLVKREG NAWLYKPDVK ALKEKLRLPV GSCELAVPLN AKARLYTVDR
301: RREAYATILH SASEYVCGAI TAAQSIRQAG STRDLVILVD DTISDHHRKG LESAGWKVRI IERIRNPKAE RDAYNEWNYS KFRLWQLTDY DKVIFIDADL
401: LILRNIDFLF AMPEITATGN NATLFNSGVM VIEPSNCTFQ LLMEHINEIT SYNGGDQGYL NEIFTWWHRI PKHMNFLKHF WEGDEEEVKA KKTRLFGANP
501: PILYVLHYLG RKPWLCFRDY DCNWNVEILR EFASDVAHAR WWKVHNKMPK KLQSYCLLRS RLKAGLEWER RQAEKANFTD GHWKRNITDP RLKTCFEKFC
601: FWESMLWHWG ENKNNSTQNS AVPATPTASL SSS

Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Arabidopsis Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.