Factsheet for Bra022342.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
vacuole 2
nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92257	Canola	plastid	97.14	97.3
Bra037570.1-P	Field mustard	plastid	91.27	87.12
AT3G18660.2	Thale cress	plastid	90.32	86.34
HORVU0Hr1G000670.2	Barley	cytosol	41.75	66.08
Os05t0426400-01	Rice	mitochondrion	36.98	65.08
Solyc11g005760.1.1	Tomato	cytosol	58.57	64.85
KRH53878	Soybean	cytosol, golgi, mitochondrion	64.6	63.69
VIT_04s0044g00990.t01	Wine grape	golgi	64.13	63.52
KRH64070	Soybean	plastid	63.97	63.07
KRH59555	Soybean	cytosol	61.75	60.78
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	56.51	57.89
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	57.14	56.69
HORVU3Hr1G091400.3	Barley	golgi	56.35	56.08
TraesCS3D01G404100.1	Wheat	golgi	56.35	55.99
TraesCS3A01G409200.2	Wheat	golgi	56.19	55.84
TraesCS3B01G442700.1	Wheat	golgi	56.03	55.68
EES01856	Sorghum	golgi	55.87	55.61
EES19558	Sorghum	golgi	55.56	55.47
HORVU1Hr1G065560.2	Barley	golgi	55.24	55.41
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	55.24	55.15
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	55.08	55.08
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	55.08	55.08
Zm00001d042627_P005	Maize	golgi	55.71	55.02
HORVU0Hr1G000650.2	Barley	golgi	55.08	54.99
Zm00001d038229_P001	Maize	plasma membrane	55.08	54.91
Zm00001d012224_P001	Maize	golgi	55.71	54.76
KRH57436	Soybean	cytosol	51.27	54.38
GSMUA_Achr3P16530_001	Banana	plastid	49.37	53.44
Bra008292.1-P	Field mustard	extracellular, plasma membrane	46.98	53.33
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	43.02	51.82
GSMUA_Achr6P18570_001	Banana	plastid	43.02	51.62
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	45.4	50.8
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	46.67	50.78
GSMUA_Achr8P29450_001	Banana	plasma membrane	49.05	49.84
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	45.4	49.31
GSMUA_Achr8P32660_001	Banana	plastid	52.86	48.83
GSMUA_Achr10P...	Banana	golgi	40.48	46.7
Bra011433.1-P	Field mustard	golgi	36.98	39.49
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	36.51	38.85
Bra031653.1-P	Field mustard	cytosol	31.9	38.07
Bra027954.1-P	Field mustard	golgi	31.9	36.95
Bra030750.1-P	Field mustard	plastid	30.63	36.69
Bra017919.1-P	Field mustard	cytosol	56.83	34.72
Bra023678.1-P	Field mustard	plasma membrane	13.81	16.32
Bra006462.1-P	Field mustard	plasma membrane	12.86	15.14
Bra015632.1-P	Field mustard	extracellular	10.0	15.07
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	12.54	14.47
Bra017301.1-P	Field mustard	plasma membrane	10.63	13.56
Bra005312.1-P	Field mustard	plasma membrane	10.48	13.36
Bra038490.1-P	Field mustard	plasma membrane	9.52	12.3

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra022342	EnsemblPlants:Bra022342.1	EnsemblPlants:Bra022342.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492	InterPro:GUX	InterPro:Glyco_trans_8
InterPro:IPR029044	UniProt:M4E0P5	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF45
SUPFAM:SSF53448	UniParc:UPI0002548074	SEG:seg	:	:	:

Description

AT3G18660 (E=5e-274) PGSIP1 | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1); transferase, transferring glycosyl groups

Coordinates

chrA05:+:18298966..18302558

Molecular Weight (calculated)

72823.1 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.429

Length

630 amino acids

Sequence
(BLAST)

001: MANPPAAAVA TSATGDTRRR LSASISEAIC KRRFRRNSKS GGRSDMVKPF NILNFPTQDK NSSCCCSVFQ IVKVLLCILL SATLFTIIYS PEAYHHSLSH
101: SSRWIWRRQD PRYVSDLEIS WDDVTKTIES VQEGRTIGVL NFDTKEIRRW RDVAKTKDNE DDENVVELDL EHADKNVTWD ALYPEWIDEE QEKDVPVCPN
201: LPKIKVPTRR LDLVVVKLPC RKEGNWSRDV ARLHLQMAAA TVAVSAKGFF RGHVMFVSRC FPIPNLFRCK DLVSRRGNVW LYKPNLDTLR DKLQLPIGSC
301: ELSLPLGIKE RPTLGNPKRE TYATILHSAH VYVCGAIAAA QSIRQSGSTR DLVILVDENI SGYHRSGLEA AGWQIRTIQR IRNPKAEKDA YNEWNYSKFR
401: LWQLTDYNKI IFIDADLLIL RNIDFLFSMP EISATGNNGT LFNSGVMVIE PCNCTFQLLM EHINEIESYN GGDQGYLNEV FTWWHRIPKH MNFLKHFWVG
501: DEDDVRRKKT ELFGAEPPIL YFATDIAHRR WWMVHDAMPQ ELHQFCYLRS KQKAQLEYDR RQAEAANYAD GHWKIRVKDP RFKICIDKLC NWKSMLRHWG
601: ESNWTDYESF VPTPPAITAV RKTSLPGHNL

Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Arabidopsis Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.