Factsheet for Bra011433.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
golgi 4
nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75345	Canola	golgi, plastid	98.98	96.85
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	91.69	91.39
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	88.14	83.07
KRH15352	Soybean	golgi	66.27	65.82
KRH05688	Soybean	golgi	65.42	65.2
Solyc04g078990.2.1	Tomato	golgi	61.19	62.67
VIT_18s0001g10580.t01	Wine grape	golgi	62.54	62.54
PGSC0003DMT400020680	Potato	golgi	60.68	61.83
KRH61283	Soybean	golgi	61.69	61.18
Solyc04g078980.2.1	Tomato	golgi	57.46	60.11
PGSC0003DMT400020678	Potato	golgi	57.12	59.75
TraesCS4B01G301200.1	Wheat	golgi	52.54	52.28
Zm00001d027938_P001	Maize	plasma membrane	52.37	52.11
TraesCS4D01G299500.1	Wheat	golgi	52.03	51.6
TraesCS4A01G004100.1	Wheat	golgi	51.69	51.52
EER95378	Sorghum	golgi, plastid	51.69	50.41
Os03t0184300-02	Rice	golgi	52.37	50.33
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	42.71	48.0
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	43.56	47.07
Bra031653.1-P	Field mustard	cytosol	41.53	46.4
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	46.27	46.11
Bra027954.1-P	Field mustard	golgi	42.2	45.77
Bra030750.1-P	Field mustard	plastid	39.66	44.49
Bra037570.1-P	Field mustard	plastid	43.9	39.24
Bra008292.1-P	Field mustard	extracellular, plasma membrane	35.42	37.66
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	38.64	37.07
Bra022342.1-P	Field mustard	plastid	39.49	36.98
Bra017919.1-P	Field mustard	cytosol	41.69	23.86
Bra023678.1-P	Field mustard	plasma membrane	15.08	16.7
Bra006462.1-P	Field mustard	plasma membrane	14.92	16.45
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	14.41	15.57
Bra017301.1-P	Field mustard	plasma membrane	12.88	15.38
Bra005312.1-P	Field mustard	plasma membrane	12.54	14.98
Bra015632.1-P	Field mustard	extracellular	10.51	14.83
Bra038490.1-P	Field mustard	plasma membrane	11.86	14.34

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra011433	EnsemblPlants:Bra011433.1	EnsemblPlants:Bra011433.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492	InterPro:GUX	InterPro:Glyco_trans_8
InterPro:IPR029044	UniProt:M4D4M9	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002545CBA	SEG:seg	:	:

Description

AT4G33330 (E=1e-307) PGSIP3 | transferase, transferring glycosyl groups

Coordinates

chrA01:+:2185269..2188581

Molecular Weight (calculated)

69298.4 Da

IEP (calculated)

7.863

GRAVY (calculated)

-0.319

Length

590 amino acids

Sequence
(BLAST)

001: MMMIMKIAPS KSTLIRFNLI LFALSFLLST AFFLHPSSSV YFISAVSFVG CSFRDCTPKV ERGVKMQELI VENQINKIDS SNQTKLEAPS FMDEIITRGL
101: GKTKIGMVNM EESDLTQWKR YGETIHIHFE RVSKFFSWHD LFPEWIDEEE DTEVPTCPEI PMPDFESLEM LDLVVVKLPC KYPEEGWRRE VLRLQVNLVA
201: ANLAAKKVKT DWTWKSKVLF WSKCQPMIEI FRCDDLEKRE GDWWLYRPEV VRLQQKLSLP IGSCNLALPL WAPQGIDKVY DLTKIQAETR RPKREAYATV
301: LHSSESYVCG AITLAQSLLQ TNTKRDLILL HDDSISIAKL RALAAAGWKL RRILRIRNPL AEKDSYNEYN YSKFRLWQLT DYDKVVFIDA DIIVLRNLDI
401: LFHFPQMSAT GNDVWIFNSG VMVIEPSNCT FSTIMSQRSD IVSYNGGDQG YLNEIFVWWH RLPRRVNFLK NFWANTTNER NIKDHLFAAE PPQLYAVHYL
501: GLKPWLCYRD YDCNFDVDEQ LVYASDAAHG RWWKVHDAMD EDLQKFCRLT EQRRTEINWE RRRARLRGST DFHWRINVTD PRRRRSYLIG

Best Arabidopsis Sequence Match ( AT4G33330.4 )
(BLAST)

001: MKDKCLSFRN EMTIMTMIMK MAPSKSALIR FNLVLLGFSF LLYTAIFFHP SSSVYFSSGA SFVGCSFRDC TPKVVRGVKM QELVEENEIN KKDLLTASNQ
101: TKLEAPSFME EILTRGLGKT KIGMVNMEEC DLTNWKRYGE TVHIHFERVS KLFKWQDLFP EWIDEEEETE VPTCPEIPMP DFESLEKLDL VVVKLPCNYP
201: EEGWRREVLR LQVNLVAANL AAKKGKTDWR WKSKVLFWSK CQPMIEIFRC DDLEKREADW WLYRPEVVRL QQRLSLPVGS CNLALPLWAP QGVDKVYDLT
301: KIEAETKRPK REAYVTVLHS SESYVCGAIT LAQSLLQTNT KRDLILLHDD SISITKLRAL AAAGWKLRRI IRIRNPLAEK DSYNEYNYSK FRLWQLTDYD
401: KVIFIDADII VLRNLDLLFH FPQMSATGND VWIYNSGIMV IEPSNCTFTT IMSQRSEIVS YNGGDQGYLN EIFVWWHRLP RRVNFLKNFW SNTTKERNIK
501: NNLFAAEPPQ VYAVHYLGWK PWLCYRDYDC NYDVDEQLVY ASDAAHVRWW KVHDSMDDAL QKFCRLTKKR RTEINWERRK ARLRGSTDYH WKINVTDPRR
601: RRSYLIG

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.