Factsheet for GSMUA_Achr3P01740_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	63.0	65.52
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	66.3	61.15
Zm00001d027938_P001	Maize	plasma membrane	52.2	48.06
Solyc04g078990.2.1	Tomato	golgi	49.82	47.22
VIT_18s0001g10580.t01	Wine grape	golgi	50.73	46.95
PGSC0003DMT400020680	Potato	golgi	49.27	46.46
Os03t0184300-02	Rice	golgi	52.2	46.42
TraesCS4D01G299500.1	Wheat	golgi	50.55	46.39
TraesCS4B01G301200.1	Wheat	golgi	50.37	46.37
TraesCS4A01G004100.1	Wheat	golgi	50.18	46.28
EER95378	Sorghum	golgi, plastid	51.28	46.28
KRH15352	Soybean	golgi	49.45	45.45
Solyc04g078980.2.1	Tomato	golgi	46.89	45.39
KRH05688	Soybean	golgi	48.9	45.1
PGSC0003DMT400020678	Potato	golgi	46.34	44.86
KRH61283	Soybean	golgi	48.53	44.54
Bra011433.1-P	Field mustard	golgi	47.07	43.56
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	47.07	43.41
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	46.89	43.24
CDX75345	Canola	golgi, plastid	46.52	42.12
CDX68968	Canola	golgi	46.34	41.75
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	46.15	40.26
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	37.36	39.01
GSMUA_Achr6P18570_001	Banana	plastid	36.81	38.29
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	39.01	37.83
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	39.38	37.13
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	37.36	35.17
GSMUA_Achr3P16530_001	Banana	plastid	37.36	35.05
GSMUA_Achr8P29450_001	Banana	plasma membrane	38.64	34.03
GSMUA_Achr10P...	Banana	golgi	31.68	31.68
GSMUA_Achr8P32660_001	Banana	plastid	39.56	31.67
CDX99330	Canola	cytosol	7.88	29.86
CDY28292	Canola	golgi	37.36	27.6
CDY28291	Canola	nucleus	10.99	25.97
GSMUA_Achr11P...	Banana	plasma membrane	13.37	13.59
GSMUA_Achr5P18580_001	Banana	plasma membrane	13.0	12.98
GSMUA_Achr1P01490_001	Banana	cytosol	8.79	11.14
GSMUA_Achr5P20900_001	Banana	plasma membrane	8.79	11.14
GSMUA_Achr11P...	Banana	cytosol	8.42	10.67
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	8.24	10.44
GSMUA_Achr5P15460_001	Banana	cytosol	8.06	10.21
GSMUA_Achr5P13360_001	Banana	cytosol	8.06	10.21

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009834	GO:GO:0009987	GO:GO:0015020	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0045492	EnsemblPlantsGene:GSMUA_Achr3G01740_001	EnsemblPlants:GSMUA_Achr3P01740_001	EnsemblPlants:GSMUA_Achr3T01740_001	InterPro:GUX
InterPro:IPR029044	UniProt:M0SAZ2	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI000296A786	SEG:seg	:	:	:

Description

glycosyl transferase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G01740_001]

Coordinates

chr3:-:1176708..1180320

Molecular Weight (calculated)

60870.7 Da

IEP (calculated)

5.911

GRAVY (calculated)

-0.200

Length

546 amino acids

Sequence
(BLAST)

001: MGFGGEMMKA VASKALVIKI NVAFLGFFIF AYILLLVLQP ASLYNQNATK MVSCSLRGCH SKSPLGSSSC WHLQAEGSIR LQAARENRTT METVPSFLKR
101: LHGGMKVALV NVGAEEALDW GLPSGTTAVD FEPISDNFQW KDLFPEWIDE EEENEGPSCP EIPMPDLSSC GEVGMVVAKL PCWRAETAGW ARDLSRLQVH
201: LVAAAAAAQR GRRDARGAVK VVLLSACRPM MELFRCDDLV AREGEWWMYE AEAWRLEEKL ALPIGSCNLA LPLWDKVGGG GLEEWLGNNI NISGGLAEAA
301: TPRRREAYAT VLHSSDTYVC GAVALAHSIV RTGSTRDLVL LHDNTVAPHK LRGLAAAGWT LREIERIRNP RAQRGTYNDL DVLFRFPQIS ATGNDGVIFN
401: SGVMVIEPSN CTFKALMALR EDVVSYNGGD QGFLNEVFVM KNHLFASDPP KLYSIHYLGI KPWMCYREYD CNWNIGDQRA YASDAAHATW WRLHDQMDER
501: LHEFCGLPAA RREELEQERR EAEEFGFGDG HWRLWVSGDG RNVTKQ

Best Arabidopsis Sequence Match ( AT4G33330.2 )
(BLAST)

001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR PNINFRMVSA
601: QLEKCLAFDE KGIKVINLAE EMENTL

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.