Factsheet for GSMUA_Achr6P10110_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	65.52	63.0
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	65.9	58.45
KRH05688	Soybean	golgi	51.81	45.95
KRH15352	Soybean	golgi	51.62	45.62
VIT_18s0001g10580.t01	Wine grape	golgi	50.86	45.25
Zm00001d027938_P001	Maize	plasma membrane	50.29	44.52
Solyc04g078990.2.1	Tomato	golgi	48.76	44.44
KRH61283	Soybean	golgi	50.29	44.37
TraesCS4B01G301200.1	Wheat	golgi	50.1	44.35
TraesCS4A01G004100.1	Wheat	golgi	49.9	44.26
TraesCS4D01G299500.1	Wheat	golgi	49.9	44.03
PGSC0003DMT400020680	Potato	golgi	48.19	43.7
EER95378	Sorghum	golgi, plastid	50.29	43.64
Solyc04g078980.2.1	Tomato	golgi	46.86	43.62
Os03t0184300-02	Rice	golgi	50.86	43.49
PGSC0003DMT400020678	Potato	golgi	46.48	43.26
Bra011433.1-P	Field mustard	golgi	48.0	42.71
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	48.0	42.57
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	47.81	42.4
CDX75345	Canola	golgi, plastid	48.0	41.79
CDX68968	Canola	golgi	47.24	40.92
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	48.0	40.26
CDX99330	Canola	cytosol	9.71	35.42
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	33.71	33.84
GSMUA_Achr6P18570_001	Banana	plastid	33.71	33.71
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	36.0	33.57
GSMUA_Achr3P16530_001	Banana	plastid	36.19	32.65
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	35.62	32.3
GSMUA_Achr10P...	Banana	golgi	33.33	32.05
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	35.05	31.72
GSMUA_Achr8P29450_001	Banana	plasma membrane	36.95	31.29
GSMUA_Achr8P32660_001	Banana	plastid	38.48	29.62
CDY28291	Canola	nucleus	12.0	27.27
CDY28292	Canola	golgi	37.9	26.93
GSMUA_Achr11P...	Banana	plasma membrane	13.52	13.22
GSMUA_Achr5P18580_001	Banana	plasma membrane	12.95	12.43
GSMUA_Achr1P01490_001	Banana	cytosol	8.76	10.67
GSMUA_Achr11P...	Banana	cytosol	8.76	10.67
GSMUA_Achr5P20900_001	Banana	plasma membrane	8.76	10.67
GSMUA_Achr5P13360_001	Banana	cytosol	8.76	10.67
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	8.57	10.44
GSMUA_Achr5P15460_001	Banana	cytosol	8.38	10.21

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009834	GO:GO:0009987	GO:GO:0015020	GO:GO:0016740	GO:GO:0045492
EnsemblPlantsGene:GSMUA_Achr6G10110_001	EnsemblPlants:GSMUA_Achr6P10110_001	EnsemblPlants:GSMUA_Achr6T10110_001	InterPro:GUX	InterPro:IPR029044	UniProt:M0T5R0
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000295BC24
SEG:seg	:	:	:	:	:

Description

glycosyl transferase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G10110_001]

Coordinates

chr6:-:6758278..6761426

Molecular Weight (calculated)

58627.6 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.076

Length

525 amino acids

Sequence
(BLAST)

001: MGLGSGMMKT VASKALVIKI NLAFLSLFFL SYILLLLLQP SSVYEQNAAA EIVRCSLRDC RVKKLNVGIL QVEGVRVQRK AARENRTAME TVPGFLRTLH
101: GNAKLGLVNI VEDEAVEWGL VGGRTTTVDF ERVSENLKWE DLFPEWIDEE EENEGPSCPE LPMPDFSLYG NVDVVVAKLP CRRSGTAGWS RDVSRLQVHL
201: VAATTAARRG RRDARGAVKV VLLSACRPMM ELFPCDEMVV REGKWWLYEA EARRLEQKVA LPVGSCNLAL PLWGKELVPS TAKDVHASIT IGWWRRTCTA
301: VDISAGSTSC FSLKPSAYAT VLHSSDTYVC GAIILAHSIL TDYHRVVFID ADILVLRNLD LLFRFPQISA TGNDGVIFNS GIMVIEPSHC TFQALMASRE
401: DVISYNGGDQ GFLNEAFVMK NRLLAADPPE LYAIHYLGLK PWMCYRDYDC NWNVGDQRVY ASDAAHGTWW KLHDQMEAGL QRFCSLSGTR REQLEQERRQ
501: AAELGFGDGH WRLKVSGNGR TVTTE

Best Arabidopsis Sequence Match ( AT4G33330.2 )
(BLAST)

001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR PNINFRMVSA
601: QLEKCLAFDE KGIKVINLAE EMENTL

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.