CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05688	Soybean	golgi	93.6	93.92
KRH61283	Soybean	golgi	74.75	74.62
VIT_18s0001g10580.t01	Wine grape	golgi	68.69	69.15
Solyc04g078990.2.1	Tomato	golgi	64.98	67.01
PGSC0003DMT400020680	Potato	golgi	64.81	66.49
Bra011433.1-P	Field mustard	golgi	65.82	66.27
CDX75345	Canola	golgi, plastid	65.82	64.84
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	64.14	64.36
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	64.14	64.36
Solyc04g078980.2.1	Tomato	golgi	60.1	63.3
CDX68968	Canola	golgi	64.48	63.2
PGSC0003DMT400020678	Potato	golgi	59.43	62.59
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	64.48	61.18
TraesCS4B01G301200.1	Wheat	golgi	53.7	53.79
TraesCS4A01G004100.1	Wheat	golgi	53.54	53.72
TraesCS4D01G299500.1	Wheat	golgi	53.54	53.45
Zm00001d027938_P001	Maize	plasma membrane	52.69	52.78
EER95378	Sorghum	golgi, plastid	52.69	51.74
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	45.62	51.62
Os03t0184300-02	Rice	golgi	53.03	51.3
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	45.45	49.45
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	46.63	46.79
CDY28291	Canola	nucleus	17.17	44.16
KRH68559	Soybean	cytosol	25.93	43.38
KRG96838	Soybean	golgi	40.24	43.22
KRH33949	Soybean	plastid	38.72	40.14
CDY28292	Canola	golgi	49.66	39.92
KRH15962	Soybean	golgi	38.89	39.09
KRH53878	Soybean	cytosol, golgi, mitochondrion	41.08	38.18
KRH64070	Soybean	plastid	40.91	38.03
KRH59555	Soybean	cytosol	40.74	37.81
KRH72868	Soybean	golgi	40.24	37.11
KRH57436	Soybean	cytosol	34.85	34.85
CDX99330	Canola	cytosol	8.08	33.33
KRH43404	Soybean	cytosol	9.76	20.71
KRG97021	Soybean	endoplasmic reticulum	15.66	16.88
KRH68773	Soybean	endoplasmic reticulum	15.49	16.7
KRG92718	Soybean	endoplasmic reticulum	14.81	16.27
KRH04125	Soybean	plasma membrane	11.95	14.92
KRH57402	Soybean	extracellular, golgi, plasma membrane	11.78	14.68
KRH34122	Soybean	plasma membrane	12.46	14.34
KRH28078	Soybean	plasma membrane	10.94	13.77
KRH77365	Soybean	cytosol, peroxisome	6.73	12.12

Protein Annotations

EntrezGene:100780684	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EMBL:ACUP02008578	EnsemblPlantsGene:GLYMA_14G082500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492
InterPro:GUX	InterPro:Glyco_trans_8	UniProt:I1M8L8	InterPro:IPR029044	EnsemblPlants:KRH15352	ProteinID:KRH15352
ProteinID:KRH15352.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI000233B6DA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:7157272..7167404

Molecular Weight (calculated)

69081.2 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.346

Length

594 amino acids

Sequence
(BLAST)

001: MDVLSLQKLV KTAPSKALII RINLVCLAIF LVVYATLLLR PSSSVYFENA ASLVRCSLSE CHHKGEKSTT MKAVLEEPQL KSRRAKQNAT KIEVPSFFGE
101: MGKGMKIGMV NMQEDDVSEW STFGETSQVY FERVSHFFNW TDLFPEWIDE EEETDVPSCP EIPMPEFAAY EGMDVIVAKL PCKYPEEGWG RDVLRLQVHL
201: IVANLAVKKG KRDWNWKTKV VLWSKCRPML ELFRCNDLVK QENEWWYYEV DVKRLEQKVS LPVGSCNLAL PLWEQGIDKV YDTSNLEQSV QSEARAKREA
301: YVTVLHSSEG YVCGAITLAQ TLLQTGTKRD LVLLLDSSIS VAKRRALELS GWKIRLITRI RNPRAENGTY NEYNYSKFRL WQLTDYERVI FIDADIIVLR
401: NLDILFHFPQ MSATGNDQSI FNSGIMVLEP SNCTFEILMS RRHDVVSYNG GDQGFLNEIF VWWHRLPRRV NYLKNFWANT TIEAGRKNAM FAAEPPKLYA
501: IHYLGLKPWH CYKDYDCNWD VQDQRVYASD VAHRRWWKVH DAMDENLQKL CRLTRQRRME LNWERRKAGK LGLPDMHWKI NVTDPRRAGS MLIG

Best Arabidopsis Sequence Match ( AT4G33330.1 )
(BLAST)

001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR RSYLIG

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.