CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68773	Soybean	endoplasmic reticulum	96.19	96.19
KRG92718	Soybean	endoplasmic reticulum	78.77	80.22
KRH34122	Soybean	plasma membrane	70.05	74.81
VIT_14s0036g00430.t01	Wine grape	golgi	74.05	74.73
Solyc04g009920.2.1	Tomato	golgi	69.15	71.48
PGSC0003DMT400029873	Potato	plasma membrane	68.6	70.92
Solyc05g055040.2.1	Tomato	plasma membrane	66.79	69.04
PGSC0003DMT400060425	Potato	plasma membrane	66.61	68.86
CDX70822	Canola	plasma membrane	65.88	68.23
CDX88935	Canola	plasma membrane	65.88	67.98
Bra006462.1-P	Field mustard	plasma membrane	65.7	67.66
CDY58112	Canola	plasma membrane	64.97	67.55
GSMUA_Achr5P18580_001	Banana	plasma membrane	66.79	67.28
CDY21129	Canola	extracellular, golgi, plasma membrane	65.7	66.3
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	65.7	66.3
AT5G18480.1	Thale cress	golgi	64.61	66.29
Bra023678.1-P	Field mustard	plasma membrane	64.07	66.23
CDY29996	Canola	extracellular, plasma membrane	65.52	66.12
GSMUA_Achr11P...	Banana	plasma membrane	64.25	65.92
CDY02625	Canola	plasma membrane	63.7	65.85
EES11117	Sorghum	plasma membrane	58.8	60.45
HORVU2Hr1G089320.8	Barley	cytosol	52.45	60.08
Zm00001d025865_P001	Maize	plasma membrane	58.44	60.07
TraesCS2B01G399000.1	Wheat	plasma membrane	58.44	59.63
TraesCS2A01G381700.1	Wheat	plasma membrane	58.44	59.52
TraesCS6B01G257400.2	Wheat	plasma membrane	51.72	59.38
TraesCS2D01G378200.1	Wheat	plasma membrane	58.08	59.26
TraesCS6D01G211500.1	Wheat	plasma membrane	57.71	58.78
Os02t0624400-01	Rice	golgi	57.71	58.14
TraesCS6A01G223900.1	Wheat	plasma membrane	56.26	57.3
HORVU6Hr1G058670.11	Barley	endoplasmic reticulum, golgi	44.28	56.35
Os04t0517400-01	Rice	cytosol, plasma membrane	26.32	48.99
KRH57402	Soybean	extracellular, golgi, plasma membrane	17.79	20.55
KRH04125	Soybean	plasma membrane	17.42	20.17
KRH28078	Soybean	plasma membrane	17.06	19.92
KRH77365	Soybean	cytosol, peroxisome	11.25	18.79
KRH68559	Soybean	cytosol	11.07	17.18
KRH53878	Soybean	cytosol, golgi, mitochondrion	19.42	16.74
KRH72868	Soybean	golgi	19.42	16.61
KRH64070	Soybean	plastid	19.24	16.59
KRH15962	Soybean	golgi	17.6	16.41
KRH59555	Soybean	cytosol	19.06	16.41
KRH57436	Soybean	cytosol	17.6	16.33
KRH15352	Soybean	golgi	16.88	15.66
KRH05688	Soybean	golgi	16.52	15.37
KRH33949	Soybean	plastid	15.61	15.01
KRH61283	Soybean	golgi	16.15	14.96
KRG96838	Soybean	golgi	14.88	14.83
KRH43404	Soybean	cytosol	0.91	1.79

Protein Annotations

EntrezGene:100810905	Gene3D:3.90.550.10	MapMan:5.4.13.2	EMBL:ACUP02012171	EnsemblPlantsGene:GLYMA_19G247000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_8	InterPro:IPR029044	UniProt:K7N057	EnsemblPlants:KRG97021	ProteinID:KRG97021	ProteinID:KRG97021.1
InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF65	SUPFAM:SSF53448	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296545C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:49347606..49353680

Molecular Weight (calculated)

61890.3 Da

IEP (calculated)

8.278

GRAVY (calculated)

0.150

Length

551 amino acids

Sequence
(BLAST)

001: MKSNDVTRWL CSILFCIVLV CVQFEGCVGS KTKKTDEAYV TLLYGDEFLL GVRVLGKSIR NTGSNKDMVV LVSDGVSDYA KSLLRADGWI VEMISLLANP
101: NRVRPKRFWG VYTKLKIFNM TDYKKVVYLD ADTIVVKNID DLFKCGKFCA NLKHSERLNS GVMVVEPSAT LFNDMMSKIK TTASYTGGDQ GFLNSYYSGF
201: PNAHVFEPNL SPEMFSSRPI PEMERLSTLY NADVGLYMLA NKWMVDENEL RVIHYTLGPL KPWDWWTSWL LKPVDVWQDV REQLDESLPG TGGGQNSKDS
301: FLVKFLFLLP FCALLFCCYH SFTKNQGYFS TLCRSSLCDQ VRHLYYRIRS NGPLAYNSIS TSTTNSVHQL LNGAQNKAPA YLGGISVCVC FVVAVVSLGL
401: ALLIVPRQVM PWTGLLLMYE WTFTIFFILF GGYIHLIYQW GKIVGSRVAS SLSQPGSDYD SEKRHQRQIS SCDVATWYYG LGMALLAIAA PSLPCLFGIT
501: ALFLRLGLMV VGGIILASFM TYASEHLAIR SFLKGFDERE NARNSGSCFL C

Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)

001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC

Arabidopsis Description

IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.