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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21129 Canola extracellular, golgi, plasma membrane 99.08 99.08
Bra006462.1-P Field mustard plasma membrane 79.3 80.93
Bra023678.1-P Field mustard plasma membrane 75.46 77.3
VIT_14s0036g00430.t01 Wine grape golgi 69.05 69.05
KRG92718 Soybean endoplasmic reticulum 65.75 66.36
KRH68773 Soybean endoplasmic reticulum 66.3 65.7
KRG97021 Soybean endoplasmic reticulum 66.3 65.7
Solyc04g009920.2.1 Tomato golgi 63.19 64.73
PGSC0003DMT400029873 Potato plasma membrane 62.64 64.17
Solyc05g055040.2.1 Tomato plasma membrane 62.27 63.79
PGSC0003DMT400060425 Potato plasma membrane 62.09 63.6
GSMUA_Achr11P... Banana plasma membrane 60.99 62.01
GSMUA_Achr5P18580_001 Banana plasma membrane 61.72 61.61
KRH34122 Soybean plasma membrane 58.06 61.43
EES11117 Sorghum plasma membrane 57.88 58.96
Zm00001d025865_P001 Maize plasma membrane 57.51 58.58
TraesCS6B01G257400.2 Wheat plasma membrane 51.28 58.33
HORVU2Hr1G089320.8 Barley cytosol 51.28 58.21
TraesCS2B01G399000.1 Wheat plasma membrane 56.96 57.59
Os02t0624400-01 Rice golgi 57.51 57.4
TraesCS6D01G211500.1 Wheat plasma membrane 56.78 57.3
TraesCS2A01G381700.1 Wheat plasma membrane 56.78 57.3
TraesCS2D01G378200.1 Wheat plasma membrane 56.59 57.22
TraesCS6A01G223900.1 Wheat plasma membrane 55.86 56.38
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 43.77 55.2
Os04t0517400-01 Rice cytosol, plasma membrane 25.82 47.64
Bra038490.1-P Field mustard plasma membrane 17.58 19.67
Bra005312.1-P Field mustard plasma membrane 17.03 18.83
Bra017301.1-P Field mustard plasma membrane 16.67 18.42
Bra030750.1-P Field mustard plastid 16.12 16.73
Bra031653.1-P Field mustard cytosol 15.75 16.29
Bra027954.1-P Field mustard golgi 15.93 15.99
Bra008292.1-P Field mustard extracellular, plasma membrane 15.2 14.96
Bra011433.1-P Field mustard golgi 15.57 14.41
Bra034558.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 15.38 14.19
Bra016419.1-P Field mustard golgi, peroxisome, plasma membrane 15.38 13.66
Bra037570.1-P Field mustard plastid 16.3 13.48
Bra022342.1-P Field mustard plastid 14.47 12.54
Bra017919.1-P Field mustard cytosol 18.5 9.8
Bra015632.1-P Field mustard extracellular 4.4 5.74
Protein Annotations
Gene3D:3.90.550.10MapMan:5.4.13.2EnsemblPlantsGene:Bra040140EnsemblPlants:Bra040140.1EnsemblPlants:Bra040140.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757
InterPro:Glyco_trans_8InterPro:IPR029044UniProt:M4FGB2InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183
PANTHER:PTHR11183:SF65SUPFAM:SSF53448SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002544EB3SEG:seg
Description
AT5G18480 (E=2e-231) PGSIP6 | PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups
Coordinates
chrA01:+:28456282..28458881
Molecular Weight (calculated)
61107.6 Da
IEP (calculated)
9.120
GRAVY (calculated)
0.192
Length
546 amino acids
Sequence
(BLAST)
001: MAKLNPSFWV ISITLLSIQF KGSFASQSTN EAYVTLLYGD EFLLGVRVLG KSIRDTGSHK DMVVLVSDGV SDYSKKLLMA DGWKVEKISL LANPNQVHPK
101: RFWGVYTKLK IFNMTAYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSAALFDDMV KQVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSLSPEAVK ARPVPKMERL STLYNADVGL YMLANKWMVD DSKLHIIHYT LGPLKPWDWW TAWLVKPVEA WHSIRVGLEE TLPGTGGGKT PNDEFIVKLL
301: FLLPLCGFLF CLYRSLKGRD FLSSLCRNSV CNQIRHLYYK VRSNGTLGYS GVSTLSTMNS NYQLHTGAHS KVPQYLGAVS VVVCFAAVLT SIGVSFMIVP
401: RQIMPWTGLI LIYEWTFTIF FLLYGGFLLL VYQYGKKVAV QTGSPSSQTE SSLDDSGKGH QRADASCDFT ALYYGLGMVF LAFAAISLPY MLGVTALFLR
501: LGLMIAVAMV LVSFMTYASE HLAVRWFLKG LEDRDTTRTK SICFLC
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.