Factsheet for Bra037570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 2
mitochondrion 2
nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol, mitochondrion, nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18535	Canola	plastid	98.94	98.94
CDY53768	Canola	plastid	97.58	97.58
AT3G18660.2	Thale cress	plastid	92.12	92.26
Bra022342.1-P	Field mustard	plastid	87.12	91.27
Os05t0426400-01	Rice	mitochondrion	38.94	71.79
HORVU0Hr1G000670.2	Barley	cytosol	42.88	71.11
Solyc11g005760.1.1	Tomato	cytosol	60.15	69.77
VIT_04s0044g00990.t01	Wine grape	golgi	66.52	69.03
KRH53878	Soybean	cytosol, golgi, mitochondrion	66.82	69.01
KRH64070	Soybean	plastid	65.91	68.08
KRH59555	Soybean	cytosol	65.0	67.03
HORVU3Hr1G091400.3	Barley	golgi	58.33	60.82
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	58.48	60.79
KRH57436	Soybean	cytosol	54.7	60.77
TraesCS3D01G404100.1	Wheat	golgi	58.33	60.73
TraesCS3A01G409200.2	Wheat	golgi	58.18	60.57
TraesCS3B01G442700.1	Wheat	golgi	58.03	60.41
EES01856	Sorghum	golgi	57.73	60.19
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	55.61	59.67
Zm00001d042627_P005	Maize	golgi	57.58	59.56
EES19558	Sorghum	golgi	56.82	59.43
Zm00001d012224_P001	Maize	golgi	57.58	59.28
Zm00001d038229_P001	Maize	plasma membrane	56.67	59.18
HORVU1Hr1G065560.2	Barley	golgi	56.06	58.92
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	56.21	58.89
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	56.06	58.73
HORVU0Hr1G000650.2	Barley	golgi	55.91	58.48
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	55.61	58.16
GSMUA_Achr3P16530_001	Banana	plastid	51.06	57.9
Bra008292.1-P	Field mustard	extracellular, plasma membrane	48.03	57.12
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	44.24	55.83
GSMUA_Achr6P18570_001	Banana	plastid	44.24	55.62
GSMUA_Achr8P29450_001	Banana	plasma membrane	51.36	54.68
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	46.52	54.53
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	47.58	54.23
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	46.97	53.45
GSMUA_Achr10P...	Banana	golgi	42.73	51.65
GSMUA_Achr8P32660_001	Banana	plastid	53.18	51.47
Bra011433.1-P	Field mustard	golgi	39.24	43.9
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	38.79	43.24
Bra031653.1-P	Field mustard	cytosol	33.64	42.05
Bra030750.1-P	Field mustard	plastid	32.58	40.87
Bra027954.1-P	Field mustard	golgi	33.64	40.81
Bra017919.1-P	Field mustard	cytosol	58.03	37.15
Bra023678.1-P	Field mustard	plasma membrane	14.7	18.2
Bra006462.1-P	Field mustard	plasma membrane	13.94	17.2
Bra015632.1-P	Field mustard	extracellular	10.45	16.51
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	13.48	16.3
Bra017301.1-P	Field mustard	plasma membrane	11.52	15.38
Bra005312.1-P	Field mustard	plasma membrane	11.36	15.18
Bra038490.1-P	Field mustard	plasma membrane	10.45	14.14

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra037570	EnsemblPlants:Bra037570.1	EnsemblPlants:Bra037570.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492
InterPro:GUX	InterPro:Glyco_trans_8	InterPro:IPR029044	UniProt:M4F907	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501
PANTHER:PTHR11183	PANTHER:PTHR11183:SF45	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002544E7C	SEG:seg

Description

AT3G18660 (E=0.0) PGSIP1 | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1); transferase, transferring glycosyl groups

Coordinates

chrA01:+:22011986..22015165

Molecular Weight (calculated)

76246.0 Da

IEP (calculated)

8.008

GRAVY (calculated)

-0.405

Length

660 amino acids

Sequence
(BLAST)

001: MANPPAATAA TAATGGDSRR RLSASIEAIC KRRFRRSSKG GGRPDMVKPF NIINFPTGDK NSNCCCSKFQ IVKILLFILL LATLFTIIYS PEVYHHSLSH
101: SSSRWIWRRQ DSRYVSDLDI NWDDVTKTLE SVQEGRTIGV LNFNSNEIQR WRELAKTKDN EEEENVVVLD LDYADKNVTW ESLYPEWIDE EQETEVPVCP
201: DLPKIKVPTR RLDLIVVKLP CRKEGNWSRD VGRLHLQLAA ATVAAAAKGF FRGHVLFVSR CFPIPNLFRC KDLVARRGDV WLYKPNLDTL RDKLQLPIGS
301: CELSLPLGIK ERPSLGNPKR EAYATILHSA HVYVCGAIAA AQSIRQSGST RDLVILVDDN ISGYHRSGLE AAGWQIRTIQ RIRNPKAEKD AYNEWNYSKF
401: RLWQLTDYDK IIFIDADLLI LRNIDFLFSM PEISATGNNG TLFNSGVMVI EPCNCTFELL MEHINEIESY NGGDQGYLNE VFTWWHRIPK HMNFLKHFWV
501: GDEDDVRRKK TELFGAEPPI LYVLHYLGMK PWLCYRDYDC NFNSDIFVEF ATDIAHRRWW MVHDAMPKEL HQFCYLRSKQ KAQLEYDRRQ AEAANYTDGH
601: WKIKVKDPRF KICIDKLCNW KSMLRHWGES NSNWTDDESF VPTPPAITAV RRSSLPGHNL

Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Arabidopsis Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.