CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 1
extracellular 1
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53878	Soybean	cytosol, golgi, mitochondrion	96.87	96.87
KRH59555	Soybean	cytosol	84.51	84.38
VIT_04s0044g00990.t01	Wine grape	golgi	77.15	77.52
HORVU0Hr1G000670.2	Barley	cytosol	46.32	74.37
Os05t0426400-01	Rice	mitochondrion	41.63	74.3
KRH57436	Soybean	cytosol	69.01	74.24
Solyc11g005760.1.1	Tomato	cytosol	65.1	73.11
KRH15962	Soybean	golgi	63.69	68.87
KRH72868	Soybean	golgi	67.92	67.39
Bra037570.1-P	Field mustard	plastid	68.08	65.91
CDY18535	Canola	plastid	68.08	65.91
AT3G18660.2	Thale cress	plastid	67.76	65.71
CDY53768	Canola	plastid	67.76	65.61
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	64.63	65.04
CDX92257	Canola	plastid	63.22	64.23
Bra022342.1-P	Field mustard	plastid	63.07	63.97
EES01856	Sorghum	golgi	63.22	63.82
TraesCS3D01G404100.1	Wheat	golgi	63.22	63.72
TraesCS3A01G409200.2	Wheat	golgi	63.07	63.56
EES19558	Sorghum	golgi	62.6	63.39
HORVU3Hr1G091400.3	Barley	golgi	62.75	63.35
TraesCS3B01G442700.1	Wheat	golgi	62.75	63.25
KRH43404	Soybean	cytosol	27.7	63.21
Zm00001d012224_P001	Maize	golgi	62.91	62.71
Zm00001d038229_P001	Maize	plasma membrane	61.97	62.66
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	61.5	62.38
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	61.35	62.12
Zm00001d042627_P005	Maize	golgi	61.97	62.07
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	61.19	62.06
HORVU1Hr1G065560.2	Barley	golgi	60.72	61.78
HORVU0Hr1G000650.2	Barley	golgi	60.72	61.49
GSMUA_Achr3P16530_001	Banana	plastid	54.93	60.31
GSMUA_Achr6P18570_001	Banana	plastid	48.67	59.24
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	48.2	58.89
GSMUA_Achr8P29450_001	Banana	plasma membrane	56.81	58.55
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	50.23	57.02
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	51.33	56.65
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	50.7	55.86
GSMUA_Achr8P32660_001	Banana	plastid	59.47	55.72
GSMUA_Achr10P...	Banana	golgi	45.07	52.75
KRH61283	Soybean	golgi	39.28	42.18
KRH05688	Soybean	golgi	38.34	41.39
KRH15352	Soybean	golgi	38.03	40.91
KRH68559	Soybean	cytosol	22.69	40.85
KRG96838	Soybean	golgi	34.12	39.42
KRH33949	Soybean	plastid	34.43	38.39
KRH68773	Soybean	endoplasmic reticulum	16.59	19.24
KRG97021	Soybean	endoplasmic reticulum	16.59	19.24
KRG92718	Soybean	endoplasmic reticulum	15.34	18.11
KRH34122	Soybean	plasma membrane	13.46	16.67
KRH28078	Soybean	plasma membrane	11.42	15.47
KRH04125	Soybean	plasma membrane	11.42	15.34
KRH57402	Soybean	extracellular, golgi, plasma membrane	11.27	15.09
KRH77365	Soybean	cytosol, peroxisome	7.04	13.64

Protein Annotations

EntrezGene:100780439	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EMBL:ACUP02002737	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G214400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834
GO:GO:0009987	GO:GO:0015020	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0045492	InterPro:GUX	InterPro:Glyco_trans_8	InterPro:IPR029044	UniProt:K7KLI3	EnsemblPlants:KRH64070
ProteinID:KRH64070	ProteinID:KRH64070.1	ProteinID:KRH64071.1	ProteinID:KRH64072.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501
PANTHER:PTHR11183	PANTHER:PTHR11183:SF45	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000296A03E	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:48602815..48609917

Molecular Weight (calculated)

73568.2 Da

IEP (calculated)

6.913

GRAVY (calculated)

-0.280

Length

639 amino acids

Sequence
(BLAST)

001: MRGTMSMGTS PLAVEARHRL PASIEDLYKR RLPRNKAKDA EKPFHLSVQD RSSRCKLSFL KLILLITICG IFVTLLYSPE VYNTNHLSSS GTRWIWGGSD
101: PRYMSNVATD WDDILKITEK LTGEDELEGI GLVNFNKTEL AQWEHLIPDA THVVLPLEYA ARNVTWESLY PEWIDEEEET EVPVCPSLPS LRSPGIRLNL
201: ISVKLPCRNG GNWSRDVARL HLQLAAAALA TSFKGNYPVY VLFITNCFPI PNLFSCKELV AREGNVWLYK PNLSVLREKV QLPVGSCELA LPMRGKELVY
301: NGNAPREAYA TILHSAHVYV CGAIAAAQSI RMSGSTRDLV ILVDETISSY HRSGLEAAGW KVRTIQRIRN PKAEKDAYNE WNYSKFRLWQ LTDYDKIIFI
401: DADLLILRNI DFLFGMPEIT ATGNNATLFN SGVMVVEPSN CTFQLLMDHI NEIESYNGGD QGYLNEIFTW WHRIPRHMNF LKHFWIGDEE EKKQMKTLLF
501: GAEPPILYVL HYLGVKPWLC FRDYDCNWND DIFHEFASDV AHAKWWKVHD AMPELLQQFC LLKSKQKAQL EWDRKQAEIA NYTDGHWRIK VKDRRLKKCI
601: DNLCNWKSML RHWGETNWTD DEFYTPTPPT VITASLSAL

Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Arabidopsis Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.