CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 3
golgi 4
nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68559	Soybean	cytosol	52.98	82.54
KRH33949	Soybean	plastid	64.2	61.95
VIT_14s0128g00420.t01	Wine grape	golgi	56.6	57.33
PGSC0003DMT400048888	Potato	nucleus	50.81	55.75
Solyc01g098960.1.1	Tomato	golgi	51.9	51.71
Solyc01g098970.1.1	Tomato	golgi	49.91	50.0
AT1G54940.1	Thale cress	golgi	50.09	49.73
PGSC0003DMT400048884	Potato	golgi	49.91	49.73
Bra031653.1-P	Field mustard	cytosol	47.38	49.62
Bra027954.1-P	Field mustard	golgi	48.64	49.45
CDX95254	Canola	golgi	49.37	49.01
CDY41730	Canola	endoplasmic reticulum, golgi	49.19	48.83
Bra030750.1-P	Field mustard	plastid	46.11	48.48
AT1G08990.1	Thale cress	golgi	49.01	47.88
CDY22652	Canola	golgi	48.46	47.27
CDY32144	Canola	endoplasmic reticulum, golgi	47.56	46.96
CDY31118	Canola	golgi	48.1	46.83
CDY32143	Canola	golgi	48.1	46.83
CDY06343	Canola	golgi	46.29	46.63
KRH61283	Soybean	golgi	44.3	41.18
KRH15352	Soybean	golgi	43.22	40.24
KRH05688	Soybean	golgi	42.68	39.86
KRH59555	Soybean	cytosol	40.14	34.69
KRH15962	Soybean	golgi	37.07	34.69
KRH53878	Soybean	cytosol, golgi, mitochondrion	39.78	34.43
KRH64070	Soybean	plastid	39.42	34.12
KRH72868	Soybean	golgi	38.7	33.23
KRH57436	Soybean	cytosol	35.08	32.66
KRH43404	Soybean	cytosol	9.76	19.29
KRG92718	Soybean	endoplasmic reticulum	14.65	14.97
KRG97021	Soybean	endoplasmic reticulum	14.83	14.88
KRH68773	Soybean	endoplasmic reticulum	14.65	14.7
KRH04125	Soybean	plasma membrane	12.48	14.5
KRH28078	Soybean	plasma membrane	12.3	14.41
KRH57402	Soybean	extracellular, golgi, plasma membrane	12.3	14.26
KRH34122	Soybean	plasma membrane	12.66	13.57
KRH77365	Soybean	cytosol, peroxisome	7.41	12.42

Protein Annotations

EMBL:ACUP02012166	EnsemblPlants:KRG96838	EnsemblPlantsGene:GLYMA_19G235600	EntrezGene:100809680	Gene3D:3.90.550.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR11183	PANTHER:PTHR11183:SF51	PFAM:PF01501	ProteinID:KRG96838	ProteinID:KRG96838.1	SEG:seg
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00023DD4B8	UniProt:I1NBZ7	MapMan:21.2.2.1.2.1	:

Description

hypothetical protein

Coordinates

chr19:-:48508280..48511921

Molecular Weight (calculated)

63713.3 Da

IEP (calculated)

9.471

GRAVY (calculated)

-0.273

Length

553 amino acids

Sequence
(BLAST)

001: MASNKSSPSR SHSRIKRFLI CLVLMSLPLL FFVLSEKQKR VTKMLEVDPK PRPRPAWFDV IAKGIINNKK KIKVGLVNID ARVDGSIFEQ LDTLDSQVDT
101: ISIDFDHVDK NLKWEDIFPE WIDENGKWGQ PKCPNLPMPA LQNYGDLNVV VAKVPCGIRD VFRLQVNLVV ANLAVESGWV TKMESDHRKV HVVFVGSCGP
201: MVEIFRCDDL LMHRPEYWVY RPDLRRLKHQ TLMPLGSCQI APGYAETGKE AWRIDVALTR VPKLAYVTVL HSSEAYVCGA IALAQSILGT QTMFIETDLV
301: LLADNSIGPQ STTGLKAAGW KIKRIQRILS PFAKKGAYNQ WNYSKLRMWQ LTTYDKIIFI DSDLLVLRSI HHLFVLPQLS AAPNEKTLFN SGLMVIEPSQ
401: CMFRKMMNVT SKVRSYNGGD QGFLNEIFTW WHRLPAKVNQ LKTFPSSGHG MHELPDDVYA VHYLGLKPWM CYRDYDCNWD MQDRHVFASD SAHRRWWQVY
501: DAMPKELQAY CGLTEKMNER IVKWRRIARN ASFSDGHWKI KVQDPRRGNY YSD

Best Arabidopsis Sequence Match ( AT1G54940.1 )
(BLAST)

001: MGTKTHNSRG KIFMIYLILV SLSLLGLILP FKPLFRITSP SSTLRIDLPS PQVNKNPKWL RLIRNYLPEK RIQVGFLNID EKERESYEAR GPLVLKNIHV
101: PLDHIPKNVT WKSLYPEWIN EEASTCPEIP LPQPEGSDAN VDVIVARVPC DGWSANKGLR DVFRLQVNLA AANLAVQSGL RTVNQAVYVV FIGSCGPMHE
201: IFPCDERVMR VEDYWVYKPY LPRLKQKLLM PVGSCQIAPS FAQFGQEAWR PKHEDNLASK AVTALPRRLR VAYVTVLHSS EAYVCGAIAL AQSIRQSGSH
301: KDMILLHDHT ITNKSLIGLS AAGWNLRLID RIRSPFSQKD SYNEWNYSKL RVWQVTDYDK LVFIDADFII LKKLDHLFYY PQLSASGNDK VLFNSGIMVL
401: EPSACMFKDL MEKSFKIESY NGGDQGFLNE IFVWWHRLSK RVNTMKYFDE KNHRRHDLPE NVEGLHYLGL KPWVCYRDYD CNWDISERRV FASDSVHEKW
501: WKVYDKMSEQ LKGYCGLNKN MEKRIEKWRR IAKNNSLPDR HWEIEVRDPR KTNLLVQ

Arabidopsis Description

GUX4Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ37]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.