CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027954.1-P	Field mustard	golgi	96.77	99.08
CDX95254	Canola	golgi	98.56	98.56
AT1G54940.1	Thale cress	golgi	79.71	79.71
CDY32144	Canola	endoplasmic reticulum, golgi	68.22	67.86
CDY22652	Canola	golgi	68.76	67.55
CDY32143	Canola	golgi	67.86	66.55
CDY06343	Canola	golgi	65.53	66.48
CDY31118	Canola	golgi	67.68	66.37
VIT_14s0128g00420.t01	Wine grape	golgi	52.78	53.85
PGSC0003DMT400048888	Potato	nucleus	46.5	51.39
KRG96838	Soybean	golgi	48.83	49.19
Solyc01g098960.1.1	Tomato	golgi	48.83	49.01
Solyc01g098970.1.1	Tomato	golgi	47.04	47.46
PGSC0003DMT400048884	Potato	golgi	46.86	47.03
KRH33949	Soybean	plastid	47.94	46.6
KRH68559	Soybean	cytosol	28.55	44.79
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	44.88	42.23
CDX75345	Canola	golgi, plastid	44.88	41.46
CDX68968	Canola	golgi	44.7	41.09
CDY38364	Canola	extracellular, golgi	35.01	35.14
CDX96589	Canola	golgi, peroxisome, plasma membrane	38.24	34.47
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	37.88	34.2
CDY04633	Canola	golgi, mitochondrion, peroxisome	39.14	34.12
CDY18535	Canola	plastid	40.4	34.09
CDY53768	Canola	plastid	40.4	34.09
CDX99330	Canola	cytosol	8.8	34.03
CDY13574	Canola	plastid	28.19	33.91
CDX92257	Canola	plastid	36.98	32.75
CDY28291	Canola	nucleus	11.31	27.27
CDY28292	Canola	golgi	35.55	26.79
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	38.96	20.97
CDY58112	Canola	plasma membrane	16.52	17.36
CDX70822	Canola	plasma membrane	16.34	17.11
CDY02625	Canola	plasma membrane	16.34	17.07
CDX88935	Canola	plasma membrane	16.34	17.04
CDY29996	Canola	extracellular, plasma membrane	15.8	16.12
CDY21129	Canola	extracellular, golgi, plasma membrane	15.44	15.75
CDY32093	Canola	cytosol	10.23	13.26
CDX84174	Canola	plasma membrane	11.67	13.16
CDY40445	Canola	plasma membrane	11.49	12.96
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	9.69	12.65
CDY40528	Canola	plasma membrane	8.8	8.83

Protein Annotations

EnsemblPlants:CDY41730	EnsemblPlantsGene:GSBRNA2T00073448001	Gene3D:3.90.550.10	GO:A0A078HT57	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF51	ProteinID:CDY41730
ProteinID:CDY41730.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0004EF1815	UniProt:A0A078HT57
MapMan:21.2.2.1.2.1	:	:	:	:	:

Description

BnaA09g15580DBnaA09g15580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT57]

Coordinates

chrLK032504:-:224208..226702

Molecular Weight (calculated)

64146.1 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.352

Length

557 amino acids

Sequence
(BLAST)

001: MGAKTQNSRG KIFMVYLILI SLSLVGLIVS FKPFSISNQI ITSPSSSDIR IDLPAPVVSK NPRWLRLVRD YLPAKKLRIG FLNIEEQERE SFEANGPSIM
101: ENVHVSLDPL PESLTWNSLF PEWIDEENSQ CPEIPLPKPE GSNADVDVIV AKVPCDGWSE NKGLRDVFRL QVNLAAANLA VKSGLTKVDS TVYVVFVGSC
201: GPMHEIFKCD ERVRRVDDYW VYKPNLPRLK QKLLMPVGSC HVASPFAQLG QEAWRPKNKD NLTSVAIRKH RVAYVTVLHS SEAYVCGAIA LAQSIRQSGS
301: NKDMILLHDR SITNRSLIGL SSAGWNLRLI ERIRSPFAEK DSYNEWNYSK LRVWQVTDYD KLLFIDADFI VVKKLDHLFY YPQLSAAGND KVLFNSGIMI
401: VEPSACLFKD LMEKSSKIES YNGGDQGFLN EIFVWWHRLS KRVNTMKYFD ENFKGTRNLP DDLEGVHYLG LKPWVCYRDY DCNWDMSLRR VFASDSVHEK
501: WWKVYDKMSE QLKGYCGLNK KMKYRIEKWR KIAENDSLPD RHWEIEVKDP RKNNLVQ

Best Arabidopsis Sequence Match ( AT1G54940.1 )
(BLAST)

001: MGTKTHNSRG KIFMIYLILV SLSLLGLILP FKPLFRITSP SSTLRIDLPS PQVNKNPKWL RLIRNYLPEK RIQVGFLNID EKERESYEAR GPLVLKNIHV
101: PLDHIPKNVT WKSLYPEWIN EEASTCPEIP LPQPEGSDAN VDVIVARVPC DGWSANKGLR DVFRLQVNLA AANLAVQSGL RTVNQAVYVV FIGSCGPMHE
201: IFPCDERVMR VEDYWVYKPY LPRLKQKLLM PVGSCQIAPS FAQFGQEAWR PKHEDNLASK AVTALPRRLR VAYVTVLHSS EAYVCGAIAL AQSIRQSGSH
301: KDMILLHDHT ITNKSLIGLS AAGWNLRLID RIRSPFSQKD SYNEWNYSKL RVWQVTDYDK LVFIDADFII LKKLDHLFYY PQLSASGNDK VLFNSGIMVL
401: EPSACMFKDL MEKSFKIESY NGGDQGFLNE IFVWWHRLSK RVNTMKYFDE KNHRRHDLPE NVEGLHYLGL KPWVCYRDYD CNWDISERRV FASDSVHEKW
501: WKVYDKMSEQ LKGYCGLNKN MEKRIEKWRR IAKNNSLPDR HWEIEVRDPR KTNLLVQ

Arabidopsis Description

GUX4Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ37]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.