CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038490.1-P	Field mustard	plasma membrane	100.0	87.5
AT4G16600.1	Thale cress	plasma membrane	91.57	79.15
CDY32093	Canola	cytosol	78.92	78.37
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	62.06	69.37
KRH77365	Soybean	cytosol, peroxisome	53.4	69.09
CDX84174	Canola	plasma membrane	79.63	68.83
OQU82100	Sorghum	plasma membrane	68.62	68.46
GSMUA_Achr11P...	Banana	cytosol	68.85	68.21
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	68.85	68.21
CDY40445	Canola	plasma membrane	78.69	68.02
CDY40528	Canola	plasma membrane	87.82	67.57
GSMUA_Achr5P20900_001	Banana	plasma membrane	67.92	67.29
GSMUA_Achr5P13360_001	Banana	cytosol	67.21	66.59
GSMUA_Achr5P15460_001	Banana	cytosol	66.98	66.36
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	69.09	66.29
GSMUA_Achr1P01490_001	Banana	cytosol	66.28	65.66
HORVU2Hr1G097240.1	Barley	cytosol, mitochondrion, plasma membrane	66.98	64.85
KRH28078	Soybean	plasma membrane	70.73	63.98
KRH57402	Soybean	extracellular, golgi, plasma membrane	70.02	62.68
KRH04125	Soybean	plasma membrane	69.79	62.6
Zm00001d002725_P001	Maize	plasma membrane	68.15	62.05
PGSC0003DMT400012126	Potato	plasma membrane	68.38	61.34
Solyc08g078650.2.1	Tomato	plasma membrane	67.21	61.19
TraesCS2A01G412200.1	Wheat	plasma membrane	67.45	61.15
TraesCS2B01G430800.1	Wheat	plasma membrane	67.21	61.06
TraesCS2D01G409400.1	Wheat	plasma membrane	67.45	60.89
HORVU1Hr1G054100.7	Barley	mitochondrion	62.53	59.47
OQU92160	Sorghum	golgi, mitochondrion	62.53	54.94
Zm00001d047104_P001	Maize	golgi, mitochondrion	62.3	54.51
TraesCS1D01G214700.1	Wheat	golgi	62.3	54.51
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	62.3	54.18
Zm00001d026165_P003	Maize	plasma membrane	59.72	53.35
Os10t0555100-01	Rice	golgi, plasma membrane	61.36	53.25
Zm00001d029920_P001	Maize	mitochondrion	62.06	52.17
TraesCS1B01G225300.1	Wheat	golgi	61.36	50.58
CDX88935	Canola	plasma membrane	22.01	17.6
CDX70822	Canola	plasma membrane	21.78	17.48
CDY02625	Canola	plasma membrane	21.78	17.45
CDY58112	Canola	plasma membrane	21.31	17.17
CDY21129	Canola	extracellular, golgi, plasma membrane	21.78	17.03
CDY29996	Canola	extracellular, plasma membrane	21.55	16.85
CDY06343	Canola	golgi	14.52	11.29
CDY32144	Canola	endoplasmic reticulum, golgi	14.29	10.89
CDY38364	Canola	extracellular, golgi	14.05	10.81
CDY22652	Canola	golgi	14.29	10.76
CDY32143	Canola	golgi	14.05	10.56
CDY31118	Canola	golgi	14.05	10.56
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	14.05	10.14
CDX75345	Canola	golgi, plastid	14.05	9.95
CDX68968	Canola	golgi	13.82	9.74
CDY41730	Canola	endoplasmic reticulum, golgi	12.65	9.69
CDY28291	Canola	nucleus	5.15	9.52
CDX95254	Canola	golgi	12.41	9.52
CDY13574	Canola	plastid	10.07	9.29
CDY04633	Canola	golgi, mitochondrion, peroxisome	13.82	9.23
CDY18535	Canola	plastid	14.05	9.09
CDY53768	Canola	plastid	14.05	9.09
CDX92257	Canola	plastid	12.41	8.43
CDX96589	Canola	golgi, peroxisome, plasma membrane	11.71	8.09
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	11.24	7.78
CDY28292	Canola	golgi	11.94	6.9
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	14.52	5.99
CDX99330	Canola	cytosol	0.94	2.78

Protein Annotations

KEGG:00051+2.4.1.-	KEGG:00512+2.4.1.-	KEGG:00513+2.4.1.-	KEGG:00514+2.4.1.-	KEGG:00522+2.4.1.-	KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-	KEGG:00550+2.4.1.-	KEGG:00561+2.4.1.-	KEGG:00563+2.4.1.-	KEGG:00600+2.4.1.-	KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-	KEGG:00604+2.4.1.-	KEGG:00906+2.4.1.-	KEGG:00908+2.4.1.-	KEGG:00941+2.4.1.-	KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-	KEGG:00945+2.4.1.-	KEGG:00965+2.4.1.-	Gene3D:3.90.550.10	MapMan:35.1	GO:A0A078H0P3
UniProt:A0A078H0P3	InterPro:Alpha_mannosyltransferase	EnsemblPlants:CDY32275	ProteinID:CDY32275	ProteinID:CDY32275.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00051729001	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF11051
PANTHER:PTHR11183	PANTHER:PTHR11183:SF93	SUPFAM:SSF53448	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EEA4F0
SEG:seg	:	:	:	:	:

Description

BnaA01g17090DBnaA01g17090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0P3]

Coordinates

chrLK032290:-:442312..445519

Molecular Weight (calculated)

49025.1 Da

IEP (calculated)

8.897

GRAVY (calculated)

0.233

Length

427 amino acids

Sequence
(BLAST)

001: MMYMGTPRDY EFYVATRVLI RSLKGHHVNA DIVVIASLDV PLNWIHNLEE MDGAKVVRVE NLENPYKKQT NFDNRFKLSL NKLYAWSLSN YDRVVMLDAD
101: NLFLKNTDEL FQCGSFCAVF INPCIFHTGL FVLQPSMEVF RDMIRELEVK RDNPDGADQG FLVSYFSDLL NQPLFRPPNN RSTVLTGHFR LPLGYQMDAS
201: YYYLKLRWNV PCGPNSVITF PGAVWLKPWY WWSWPVLPLG LSWHHQRRYT ISYSAEMPWV LIQAVFYLGI ILVTRLTRSS MSKLCHRRSD KNLTAFKMVA
301: LLLILSAYII PSFIIPQTIH PLMGWSLYLT GSFALSSIPI NAFLLPVLHV LTPWLGILGT LLVMAFPSYP DGVVRALSVF GYAFCCAPFL WVSFVKITSH
401: LQILIDKEVL FPRLGESGSS SSLSKLY

Best Arabidopsis Sequence Match ( AT4G16600.1 )
(BLAST)

001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY

Arabidopsis Description

PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.