Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32275 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 67.57 | 87.82 |
| Bra038490.1-P | Field mustard | plasma membrane | 67.57 | 76.84 |
| AT4G16600.1 | Thale cress | plasma membrane | 62.34 | 70.04 |
| CDY32093 | Canola | cytosol | 53.87 | 69.53 |
| VIT_00s2563g00010.t01 | Wine grape | cytosol, plasma membrane | 47.57 | 69.11 |
| KRH77365 | Soybean | cytosol, peroxisome | 40.72 | 68.48 |
| CDX84174 | Canola | plasma membrane | 53.87 | 60.53 |
| GSMUA_Achr8P11090_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 46.85 | 60.32 |
| CDY40445 | Canola | plasma membrane | 53.69 | 60.32 |
| GSMUA_Achr11P... | Banana | cytosol | 46.49 | 59.86 |
| OQU82100 | Sorghum | plasma membrane | 46.13 | 59.81 |
| GSMUA_Achr5P20900_001 | Banana | plasma membrane | 45.59 | 58.7 |
| GSMUA_Achr5P13360_001 | Banana | cytosol | 45.41 | 58.47 |
| Os04t0553800-01 | Rice | cytosol, mitochondrion, plastid | 46.67 | 58.2 |
| GSMUA_Achr5P15460_001 | Banana | cytosol | 45.05 | 58.0 |
| GSMUA_Achr1P01490_001 | Banana | cytosol | 44.5 | 57.31 |
| KRH28078 | Soybean | plasma membrane | 48.11 | 56.57 |
| HORVU2Hr1G097240.1 | Barley | cytosol, mitochondrion, plasma membrane | 44.86 | 56.46 |
| KRH57402 | Soybean | extracellular, golgi, plasma membrane | 47.75 | 55.56 |
| KRH04125 | Soybean | plasma membrane | 47.57 | 55.46 |
| Zm00001d002725_P001 | Maize | plasma membrane | 45.77 | 54.16 |
| PGSC0003DMT400012126 | Potato | plasma membrane | 45.77 | 53.36 |
| TraesCS2A01G412200.1 | Wheat | plasma membrane | 45.23 | 53.29 |
| TraesCS2B01G430800.1 | Wheat | plasma membrane | 45.05 | 53.19 |
| Solyc08g078650.2.1 | Tomato | plasma membrane | 44.86 | 53.09 |
| TraesCS2D01G409400.1 | Wheat | plasma membrane | 45.23 | 53.07 |
| HORVU1Hr1G054100.7 | Barley | mitochondrion | 42.34 | 52.34 |
| OQU92160 | Sorghum | golgi, mitochondrion | 42.34 | 48.35 |
| Zm00001d047104_P001 | Maize | golgi, mitochondrion | 42.16 | 47.95 |
| TraesCS1D01G214700.1 | Wheat | golgi | 41.98 | 47.75 |
| TraesCS1A01G211500.1 | Wheat | golgi, plasma membrane | 42.16 | 47.66 |
| Os10t0555100-01 | Rice | golgi, plasma membrane | 41.62 | 46.95 |
| Zm00001d026165_P003 | Maize | plasma membrane | 39.82 | 46.23 |
| Zm00001d029920_P001 | Maize | mitochondrion | 41.98 | 45.87 |
| TraesCS1B01G225300.1 | Wheat | golgi | 42.34 | 45.37 |
| CDX70822 | Canola | plasma membrane | 15.68 | 16.35 |
| CDX88935 | Canola | plasma membrane | 15.68 | 16.29 |
| CDY02625 | Canola | plasma membrane | 15.5 | 16.14 |
| CDY58112 | Canola | plasma membrane | 15.14 | 15.85 |
| CDY21129 | Canola | extracellular, golgi, plasma membrane | 15.5 | 15.75 |
| CDY29996 | Canola | extracellular, plasma membrane | 15.32 | 15.57 |
| CDY28291 | Canola | nucleus | 4.32 | 10.39 |
| CDY06343 | Canola | golgi | 10.27 | 10.38 |
| CDY32144 | Canola | endoplasmic reticulum, golgi | 10.27 | 10.18 |
| CDY38364 | Canola | extracellular, golgi | 9.91 | 9.91 |
| CDY22652 | Canola | golgi | 10.09 | 9.88 |
| CDY31118 | Canola | golgi | 10.09 | 9.86 |
| CDY32143 | Canola | golgi | 10.09 | 9.86 |
| CDY45037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 9.91 | 9.29 |
| CDX75345 | Canola | golgi, plastid | 9.91 | 9.12 |
| CDX68968 | Canola | golgi | 9.73 | 8.91 |
| CDY41730 | Canola | endoplasmic reticulum, golgi | 8.83 | 8.8 |
| CDX95254 | Canola | golgi | 8.65 | 8.62 |
| CDY04633 | Canola | golgi, mitochondrion, peroxisome | 9.73 | 8.45 |
| CDY18535 | Canola | plastid | 9.91 | 8.33 |
| CDY53768 | Canola | plastid | 9.91 | 8.33 |
| CDY13574 | Canola | plastid | 6.49 | 7.78 |
| CDX92257 | Canola | plastid | 8.47 | 7.47 |
| CDX96589 | Canola | golgi, peroxisome, plasma membrane | 7.93 | 7.12 |
| CDY38807 | Canola | endoplasmic reticulum, golgi, peroxisome | 7.57 | 6.81 |
| CDY28292 | Canola | golgi | 7.93 | 5.95 |
| CDY50243 | Canola | cytosol, peroxisome, plastid, vacuole | 10.27 | 5.51 |
| CDX99330 | Canola | cytosol | 0.54 | 2.08 |
Protein Annotations
| EnsemblPlants:CDY40528 | EnsemblPlantsGene:GSBRNA2T00069835001 | Gene3D:3.90.550.10 | GO:A0A078HUU0 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR11183 | PANTHER:PTHR11183:SF93 | ProteinID:CDY40528 |
| ProteinID:CDY40528.1 | SEG:seg | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI0004EDD5FE | UniProt:A0A078HUU0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC01g19840DBnaC01g19840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUU0]
Coordinates
chrLK032473:-:199401..201593
Molecular Weight (calculated)
63692.8 Da
IEP (calculated)
9.367
GRAVY (calculated)
0.361
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMLLCREEL DGAKVVRVEN LENPYKKQTN FDNRFKLSLN KLYAWSLSNY DRVVMLDADN LFLKSTDELF QCGSFCAVFI NPCIFHTGLF VLQPSMEVFR
101: DMIRELEVKR DNPDGADQGF LVSYFSDLLN QPLFRPPNNR STVLIGHFRL PLGYQMDATY YYLKLRWNVP CGPNSVITFP GAVWLKPWYW WSWPVLPLGI
201: SWHHQRCYTI SYSAEMPWVL IQAMFYLGII LVTRLTRSSM SKLCHRRSDK NLTAFKMVAL LLILSAYIIP SFIIPQTIHP LMGWSLYLTG SFAFSSIPIN
301: AFLLPVLHVL TPWLGILGTL LVMAFPSYPD DLKLRWNVPC GPNSVITFPG AVWLKPWYWW SWPVLPLGLS WHHQRRYTIS YSAEMPWVLI QAMFYLGIIL
401: VTRLTRSSMS KLCHRRSDKN LTAFKMVALL LILSAYIIPS FIIPQTIHPL MGWSLYLTGS FALSSIPINA FLLPVLHVLT PWLGILGTLL VMAFPSYPDG
501: VVRALSVFGY AFCCAPFLWV SFVKITSHLQ ILIDKEVLFP RLGESGSSSS LSKLY
101: DMIRELEVKR DNPDGADQGF LVSYFSDLLN QPLFRPPNNR STVLIGHFRL PLGYQMDATY YYLKLRWNVP CGPNSVITFP GAVWLKPWYW WSWPVLPLGI
201: SWHHQRCYTI SYSAEMPWVL IQAMFYLGII LVTRLTRSSM SKLCHRRSDK NLTAFKMVAL LLILSAYIIP SFIIPQTIHP LMGWSLYLTG SFAFSSIPIN
301: AFLLPVLHVL TPWLGILGTL LVMAFPSYPD DLKLRWNVPC GPNSVITFPG AVWLKPWYWW SWPVLPLGLS WHHQRRYTIS YSAEMPWVLI QAMFYLGIIL
401: VTRLTRSSMS KLCHRRSDKN LTAFKMVALL LILSAYIIPS FIIPQTIHPL MGWSLYLTGS FALSSIPINA FLLPVLHVLT PWLGILGTLL VMAFPSYPDG
501: VVRALSVFGY AFCCAPFLWV SFVKITSHLQ ILIDKEVLFP RLGESGSSSS LSKLY
001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY
Arabidopsis Description
PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.