Factsheet for TraesCS1B01G225300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G054100.7	Barley	mitochondrion	83.01	95.77
TraesCS1D01G214700.1	Wheat	golgi	90.15	95.7
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	89.77	94.7
OQU92160	Sorghum	golgi, mitochondrion	76.64	81.69
Zm00001d047104_P001	Maize	golgi, mitochondrion	76.06	80.74
Os10t0555100-01	Rice	golgi, plasma membrane	74.71	78.66
Zm00001d029920_P001	Maize	mitochondrion	75.48	76.97
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	58.69	70.53
GSMUA_Achr11P...	Banana	cytosol	57.72	69.37
GSMUA_Achr5P20900_001	Banana	plasma membrane	57.34	68.91
GSMUA_Achr5P15460_001	Banana	cytosol	56.18	67.52
GSMUA_Achr5P13360_001	Banana	cytosol	54.83	65.89
GSMUA_Achr1P01490_001	Banana	cytosol	53.86	64.73
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	47.68	64.66
KRH77365	Soybean	cytosol, peroxisome	40.93	64.24
TraesCS2B01G430800.1	Wheat	plasma membrane	57.92	63.83
KRH28078	Soybean	plasma membrane	56.18	61.65
Solyc06g060710.2.1	Tomato	cytosol	45.75	61.56
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	50.58	61.36
Solyc08g078650.2.1	Tomato	plasma membrane	55.21	60.98
CDY32093	Canola	cytosol	50.58	60.93
PGSC0003DMT400012126	Potato	plasma membrane	55.6	60.5
KRH57402	Soybean	extracellular, golgi, plasma membrane	55.41	60.17
PGSC0003DMT400030982	Potato	plasma membrane	53.86	60.0
KRH04125	Soybean	plasma membrane	54.83	59.66
AT4G16600.1	Thale cress	plasma membrane	54.25	56.88
AT2G35710.1	Thale cress	plasma membrane	53.47	55.73
Bra038490.1-P	Field mustard	plasma membrane	52.32	55.53
Bra017301.1-P	Field mustard	plasma membrane	52.9	55.47
Bra005312.1-P	Field mustard	plasma membrane	52.51	55.06
CDX84174	Canola	plasma membrane	52.32	54.86
CDY40445	Canola	plasma membrane	52.32	54.86
CDY40528	Canola	plasma membrane	45.37	42.34
TraesCS6B01G257400.2	Wheat	plasma membrane	15.06	16.25
TraesCS2B01G399000.1	Wheat	plasma membrane	16.6	15.93
TraesCS4B01G301200.1	Wheat	golgi	14.86	12.98
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	15.25	12.54
TraesCS3B01G414000.1	Wheat	plastid	14.29	12.35
TraesCS3B01G442700.1	Wheat	golgi	14.48	11.83
TraesCS5B01G074000.1	Wheat	cytosol, golgi, peroxisome	14.09	11.37

Protein Annotations

EnsemblPlants:TraesCS1B01G225300.1	EnsemblPlantsGene:TraesCS1B01G225300	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183
PANTHER:PTHR11183:SF60	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr1B:+:404512263..404515660

Molecular Weight (calculated)

58452.6 Da

IEP (calculated)

7.337

GRAVY (calculated)

0.246

Length

518 amino acids

Sequence
(BLAST)

001: MGRLPAASRR LAAVAVAILL LVIASAAGAA EERGQRGVAV RQGDGRGSHH RHAYAAMMYM GTPRDYEFYV AVRVMMRSLS RVGADADRVL IASSDVPLDW
101: VRAMREEDGM RVVVVENLKN PYEGNLGGMN RRFKLTLNKL YAWSLVDYER VVMIDSDNIF LQNTDELFQC GQFCAVFINP CYFHTGLFVL QPSMDVFNGM
201: LHDLEIGRDN SDGADQGFLV GCFPDLLDKP LFHPPENGTK LNGTYRLPLG YQMDASYYCE HLCASAPFSN VRMVASKDIY RHFTEILQIL NSIGMFHVGP
301: NSVITFPSAP WFKPWYWWSW PILPLGLSWH KQRWDDLGYA AEIPVVLMEL LMYIAIIAIT RLARPQMTKL CYNRRPEKQG ALVQWLIKLA GIVAMVAAYT
401: IPFFVIPCTV HPIMGWSMYL FGVLAFSSVV INAFLLPPLA VLTAWLGIVG MLFVMAFPWY HDGIARILVV VAYAFCSAPF LWASVVRVMD SLQTMLERDP
501: HFPRLGDPAP ETEFSKLY

Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)

001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY

Arabidopsis Description

PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.