Factsheet for TraesCS1D01G214700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G054100.7	Barley	mitochondrion	88.93	96.66
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	96.52	95.93
TraesCS1B01G225300.1	Wheat	golgi	95.7	90.15
OQU92160	Sorghum	golgi, mitochondrion	82.58	82.92
Zm00001d047104_P001	Maize	golgi, mitochondrion	81.35	81.35
Os10t0555100-01	Rice	golgi, plasma membrane	80.12	79.47
Zm00001d029920_P001	Maize	mitochondrion	81.35	78.15
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	62.7	71.0
GSMUA_Achr11P...	Banana	cytosol	61.68	69.84
GSMUA_Achr5P20900_001	Banana	plasma membrane	60.86	68.91
GSMUA_Achr5P15460_001	Banana	cytosol	60.45	68.45
GSMUA_Achr5P13360_001	Banana	cytosol	58.81	66.59
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	51.64	65.97
GSMUA_Achr1P01490_001	Banana	cytosol	57.99	65.66
KRH77365	Soybean	cytosol, peroxisome	44.06	65.15
TraesCS2D01G409400.1	Wheat	plasma membrane	61.89	63.85
Solyc06g060710.2.1	Tomato	cytosol	49.59	62.86
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	54.51	62.3
Solyc08g078650.2.1	Tomato	plasma membrane	59.84	62.26
KRH28078	Soybean	plasma membrane	60.04	62.08
CDY32093	Canola	cytosol	54.3	61.63
PGSC0003DMT400012126	Potato	plasma membrane	59.84	61.34
PGSC0003DMT400030982	Potato	plasma membrane	58.2	61.08
KRH57402	Soybean	extracellular, golgi, plasma membrane	59.43	60.8
KRH04125	Soybean	plasma membrane	58.61	60.08
AT4G16600.1	Thale cress	plasma membrane	58.81	58.1
Bra038490.1-P	Field mustard	plasma membrane	56.35	56.35
AT2G35710.1	Thale cress	plasma membrane	57.38	56.34
Bra017301.1-P	Field mustard	plasma membrane	56.76	56.07
Bra005312.1-P	Field mustard	plasma membrane	56.35	55.67
CDX84174	Canola	plasma membrane	56.15	55.47
CDY40445	Canola	plasma membrane	56.15	55.47
CDY40528	Canola	plasma membrane	47.75	41.98
TraesCS6D01G211500.1	Wheat	plasma membrane	18.24	16.45
TraesCS2D01G378200.1	Wheat	plasma membrane	17.62	15.93
TraesCS4D01G299500.1	Wheat	golgi	14.96	12.27
TraesCS3D01G374500.1	Wheat	plastid	14.96	12.23
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	15.78	12.22
TraesCS3D01G404100.1	Wheat	golgi	14.96	11.51
TraesCS5D01G078300.1	Wheat	golgi	8.81	8.67

Protein Annotations

EnsemblPlants:TraesCS1D01G214700.1	EnsemblPlantsGene:TraesCS1D01G214700	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183
PANTHER:PTHR11183:SF60	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:299926840..299929866

Molecular Weight (calculated)

55254.8 Da

IEP (calculated)

7.559

GRAVY (calculated)

0.231

Length

488 amino acids

Sequence
(BLAST)

001: MGRPPAASRR LAAAVAVAVA ILLLVIASAA EERGQRGVAV RQGEGRGSHH RHAYAAMMYM GTPRDYEFYV AVRVMMRSLS RVGADADRVL IASSDVPLDW
101: VRAMREEDGM RVVVVENLKN PYEGNLGGMN RRFKLTLNKL YAWSLVDYER VIMIDSDNIF LQNTDELFQC GQFCAVFINP CYFHTGLFVL QPSMDVFNGM
201: LHDLEIGRDN SDGADQGFLV GCFPDLLDKP LFHPPENGTK LNGTYRLPLG YQMDASYYYL KLHWHVPCGP NSVITFPSAP WFKPWYWWSW PILPLGLSWH
301: KQRWDDLGYA AEIPVVLMEL LMYTAIIALT RLARPQMTKL CYNRRPEKQG VLVQWLIKLA GIVAMVAAYT IPFFVIPCTV HPIMGWSMYL FGVLAFSTAV
401: INAFLLPPLA VLTAWLGIVG MLFVMAFPWY HDGIARILVV VAYAFCSAPF LWASIVRVMD SLQTMLERDL HFPRLGDPAP ETEFSKLY

Best Arabidopsis Sequence Match ( AT4G16600.1 )
(BLAST)

001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY

Arabidopsis Description

PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.