Factsheet for TraesCS6D01G211500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G257400.2	Wheat	plasma membrane	86.51	97.5
TraesCS6A01G223900.1	Wheat	plasma membrane	96.67	96.67
HORVU6Hr1G058670.11	Barley	endoplasmic reticulum, golgi	73.75	92.15
Os02t0624400-01	Rice	golgi	84.29	83.36
TraesCS2D01G378200.1	Wheat	plasma membrane	77.82	77.96
GSMUA_Achr5P18580_001	Banana	plasma membrane	64.33	63.62
GSMUA_Achr11P...	Banana	plasma membrane	62.66	63.13
VIT_14s0036g00430.t01	Wine grape	golgi	61.74	61.17
PGSC0003DMT400029873	Potato	plasma membrane	60.26	61.16
Solyc04g009920.2.1	Tomato	golgi	60.07	60.98
Solyc05g055040.2.1	Tomato	plasma membrane	59.52	60.41
PGSC0003DMT400060425	Potato	plasma membrane	58.96	59.85
KRG92718	Soybean	endoplasmic reticulum	58.41	58.41
CDX88935	Canola	plasma membrane	57.12	57.87
KRG97021	Soybean	endoplasmic reticulum	58.78	57.71
Bra006462.1-P	Field mustard	plasma membrane	56.93	57.57
KRH68773	Soybean	endoplasmic reticulum	58.6	57.53
AT5G18480.1	Thale cress	golgi	56.93	57.36
CDX70822	Canola	plasma membrane	56.19	57.14
CDY29996	Canola	extracellular, plasma membrane	57.49	56.96
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	57.3	56.78
CDY21129	Canola	extracellular, golgi, plasma membrane	57.12	56.59
CDY58112	Canola	plasma membrane	55.27	56.42
CDY02625	Canola	plasma membrane	55.45	56.29
Bra023678.1-P	Field mustard	plasma membrane	54.71	55.53
KRH34122	Soybean	plasma membrane	50.65	53.1
TraesCS2D01G409400.1	Wheat	plasma membrane	17.74	20.3
TraesCS1D01G214700.1	Wheat	golgi	16.45	18.24
TraesCS3D01G404100.1	Wheat	golgi	18.67	15.93
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	18.48	15.87
TraesCS3D01G374500.1	Wheat	plastid	17.38	15.75
TraesCS4D01G299500.1	Wheat	golgi	16.08	14.62
TraesCS5D01G078300.1	Wheat	golgi	11.46	12.5

Protein Annotations

EnsemblPlants:TraesCS6D01G211500.1	EnsemblPlantsGene:TraesCS6D01G211500	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF65
PFAM:PF01501	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix
MapMan:5.4.13.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:298911287..298920445

Molecular Weight (calculated)

59804.7 Da

IEP (calculated)

8.925

GRAVY (calculated)

0.172

Length

541 amino acids

Sequence
(BLAST)

001: MRWRPRKLGL WAALLAAVAL LAVGGGGGVA AAAGAEEAYV TLLYGDEFVL GVRVLGKSIR DMGTRRDLVV LVSDGVSDYS RKLLEADGFI VKHIVLLANP
101: NQVRPTRFWG VYTKLKIFNM TTYRKVVYLD ADTVVVKSIE DLFNCGKFCA NLKHSERMNS GVMVVEPSET LFKDMMSKVD SLPSYTGGDQ GFLNSYYAEF
201: ANSRVFDPNK PLTPEPETQR LSTLYNADVG LYMLANKWMV DEKELRVIHY TLGPLKPWDW WTAWLVKPVA VWQDVRQNLE ESLPGTGGGK NPHDQLVVKI
301: LFILPFCMLL CGYYGSCFQT NKELLSMRTL CAFARQARYK YKSEEALPSY STVGVASSSF GISNQKLSTG AHLKLPSYFG AIAVVVCFIC ALISLAFAFL
401: VIPRQVMPWT GLLLMFEWTF VTFFLLFGGY LRFVYKWGSF SANHAGYGSL DSSENHTGTG HQGNTSDCDT ASAFYWMGMA TISTIAPLSP TVLGITAIFA
501: KLGLMVAGGV VLASFMTYAS EHLAVSAFVK GQRGRSKIPE R

Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)

001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC

Arabidopsis Description

IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.