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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006462.1-P Field mustard plasma membrane 97.0 96.82
CDX70822 Canola plasma membrane 96.07 96.43
CDY58112 Canola plasma membrane 88.2 88.87
CDY02625 Canola plasma membrane 87.83 87.99
AT5G18480.1 Thale cress golgi 87.27 86.78
CDY29996 Canola extracellular, plasma membrane 80.9 79.12
CDY21129 Canola extracellular, golgi, plasma membrane 80.71 78.94
VIT_14s0036g00430.t01 Wine grape golgi 67.98 66.48
KRG97021 Soybean endoplasmic reticulum 67.98 65.88
Solyc04g009920.2.1 Tomato golgi 64.98 65.1
KRG92718 Soybean endoplasmic reticulum 65.92 65.06
KRH68773 Soybean endoplasmic reticulum 67.04 64.97
Solyc05g055040.2.1 Tomato plasma membrane 64.42 64.54
PGSC0003DMT400029873 Potato plasma membrane 64.42 64.54
PGSC0003DMT400060425 Potato plasma membrane 63.48 63.6
GSMUA_Achr11P... Banana plasma membrane 62.55 62.2
GSMUA_Achr5P18580_001 Banana plasma membrane 63.67 62.16
KRH34122 Soybean plasma membrane 58.24 60.27
EES11117 Sorghum plasma membrane 58.8 58.58
Zm00001d025865_P001 Maize plasma membrane 58.61 58.4
HORVU2Hr1G089320.8 Barley cytosol 52.25 58.0
TraesCS6B01G257400.2 Wheat plasma membrane 52.06 57.92
Os02t0624400-01 Rice golgi 59.18 57.77
TraesCS2A01G381700.1 Wheat plasma membrane 58.05 57.3
TraesCS2D01G378200.1 Wheat plasma membrane 57.87 57.22
TraesCS2B01G399000.1 Wheat plasma membrane 57.87 57.22
TraesCS6D01G211500.1 Wheat plasma membrane 57.87 57.12
TraesCS6A01G223900.1 Wheat plasma membrane 56.93 56.19
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 44.01 54.27
Os04t0517400-01 Rice cytosol, plasma membrane 25.66 46.28
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 17.6 22.01
CDY32093 Canola cytosol 16.85 20.93
CDX84174 Canola plasma membrane 18.54 20.04
CDY40445 Canola plasma membrane 17.79 19.23
CDY06343 Canola golgi 17.04 16.58
CDY41730 Canola endoplasmic reticulum, golgi 17.04 16.34
CDX95254 Canola golgi 17.04 16.34
CDY22652 Canola golgi 17.23 16.23
CDY31118 Canola golgi 17.23 16.2
CDY32143 Canola golgi 17.04 16.02
CDY32144 Canola endoplasmic reticulum, golgi 16.67 15.89
CDY38364 Canola extracellular, golgi 16.29 15.68
CDY40528 Canola plasma membrane 16.29 15.68
CDY04633 Canola golgi, mitochondrion, peroxisome 18.35 15.34
CDX75345 Canola golgi, plastid 16.85 14.93
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 16.48 14.86
CDX68968 Canola golgi 16.48 14.52
CDX96589 Canola golgi, peroxisome, plasma membrane 16.67 14.4
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 16.48 14.26
CDY18535 Canola plastid 17.23 13.94
CDY53768 Canola plastid 17.23 13.94
CDY13574 Canola plastid 11.05 12.74
CDX92257 Canola plastid 14.98 12.72
CDY28292 Canola golgi 14.42 10.42
CDY28291 Canola nucleus 4.49 10.39
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 19.85 10.24
CDX99330 Canola cytosol 1.12 4.17
Protein Annotations
EnsemblPlants:CDX88935EnsemblPlantsGene:GSBRNA2T00149033001Gene3D:3.90.550.10GO:A0A078DI85GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_8InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR11183
PANTHER:PTHR11183:SF65PFAM:PF01501ProteinID:CDX88935ProteinID:CDX88935.1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EEFAB5MapMan:5.4.13.2::
Description
BnaA03g07140D
Coordinates
chrLK031856:+:1677053..1679798
Molecular Weight (calculated)
59966.2 Da
IEP (calculated)
9.043
GRAVY (calculated)
0.153
Length
534 amino acids
Sequence
(BLAST)
001: MLRDKASLCV LLFSILLLSK GSFGSESSKE AYVTLLYGDE FLLGVRVLGK SIRDTGSDKD MVALVSDGVS DYSKKLLKAD GWKVEKISLL ANPNQVHPTR
101: FWGVYTKLKI FNMTDYKKVV YLDADTIVVK NIDDLFKCSK FCANLKHSER LNSGVMVVEP SQALFNDMMR KVKTLSSYTG GDQGFLNSYY PDFQNARVFD
201: PSLSPEALKA RPVPDMERLS TLYNADVGLY MLANKWMVDD SKLHVIHYTL GPLKPWDWWT AWLVKPVDAW HSIRVTLEET LPGTGGGKNR NDELVVKFLF
301: LLPLCALLFC IYRSIQGYEG SLWSQLRYIY YKIRSNRTLG YNGVSTFSTM NPSHQLHSGN SQSKVPQHLG AVSVVVCFTA VLISVGVSFL IVPRQIMPWT
401: GLILVYEWTF TIFFLLFGCF LLLVHQHGKK IAVHTESSSL DDSGKGHQRG GVSCDVTTLY YGLGMVFLSI AAVSLPYILG ITALFVRLGL MVGVAIVLAA
501: YMTYASEHLA IRWFLKGLED RRETSRSKSI CFMC
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.