Factsheet for TraesCS6B01G257400.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G058670.11	Barley	endoplasmic reticulum, golgi	82.92	91.92
TraesCS6A01G223900.1	Wheat	plasma membrane	98.12	87.06
TraesCS6D01G211500.1	Wheat	plasma membrane	97.5	86.51
Os02t0624400-01	Rice	golgi	84.79	74.41
TraesCS2B01G399000.1	Wheat	plasma membrane	78.75	70.0
GSMUA_Achr5P18580_001	Banana	plasma membrane	65.62	57.59
GSMUA_Achr11P...	Banana	plasma membrane	63.75	56.98
Solyc04g009920.2.1	Tomato	golgi	62.08	55.91
PGSC0003DMT400029873	Potato	plasma membrane	62.08	55.91
Solyc05g055040.2.1	Tomato	plasma membrane	61.25	55.16
PGSC0003DMT400060425	Potato	plasma membrane	61.04	54.97
VIT_14s0036g00430.t01	Wine grape	golgi	62.5	54.95
KRG92718	Soybean	endoplasmic reticulum	58.96	52.31
CDX88935	Canola	plasma membrane	57.92	52.06
Bra006462.1-P	Field mustard	plasma membrane	57.71	51.78
KRH68773	Soybean	endoplasmic reticulum	59.38	51.72
KRG97021	Soybean	endoplasmic reticulum	59.38	51.72
AT5G18480.1	Thale cress	golgi	57.71	51.58
CDX70822	Canola	plasma membrane	57.08	51.5
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	58.33	51.28
CDY29996	Canola	extracellular, plasma membrane	58.12	51.1
CDY21129	Canola	extracellular, golgi, plasma membrane	58.12	51.1
CDY58112	Canola	plasma membrane	56.04	50.75
CDY02625	Canola	plasma membrane	56.04	50.47
Bra023678.1-P	Field mustard	plasma membrane	55.21	49.72
KRH34122	Soybean	plasma membrane	49.79	46.32
TraesCS2B01G430800.1	Wheat	plasma membrane	17.29	17.66
TraesCS1B01G225300.1	Wheat	golgi	16.25	15.06
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	17.29	13.17
TraesCS3B01G442700.1	Wheat	golgi	17.29	13.09
TraesCS3B01G414000.1	Wheat	plastid	15.62	12.52
TraesCS4B01G301200.1	Wheat	golgi	15.0	12.14
TraesCS5B01G074000.1	Wheat	cytosol, golgi, peroxisome	16.04	11.99

Protein Annotations

EnsemblPlants:TraesCS6B01G257400.2	EnsemblPlantsGene:TraesCS6B01G257400	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF65
PFAM:PF01501	SEG:seg	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix	MapMan:5.4.13.2

Description

No Description!

Coordinates

chr6B:+:462024836..462031751

Molecular Weight (calculated)

53906.5 Da

IEP (calculated)

8.934

GRAVY (calculated)

0.071

Length

480 amino acids

Sequence
(BLAST)

001: MGTRRDLVVL VSDGVSDYSR KLLEADGFIV KHITLLANPN QVRPTRFWGV YTKLKIFNMT TYRKVVYLDA DTVVVKSIED LFNCGKFCAN LKHSERMNSG
101: VMVVEPSETL FKDMMNKVDS LPSYTGGDQG FLNSYYAEFA NSRVYDPNKP LTPEPETQRL STLYNADVGL YLLANKWMVD EKELRVIHYT LGPLKPWDWW
201: TAWLVKPVAV WQDVRQNLEE SLPGTGGGKN PRDQLVVKIL FILPFCMLLC GYYGSCFQTN KELLSMRTLC AFARQARYKY KSEEELPSYS TVGVASSSFG
301: ISNQKLSTGA HLKLPSYFGA IAVVVCFICA LISLAFAFLV IPRQVMPWMG LLLMFEWTFV TFFLLFGRYL RFVYKWGSFS ANQAGYGSLD LSENHTGTGH
401: QRNTSDCDTA SAFYWMGMAT ISTIAPLSPT VLGITAIFAK LGLMVAGGVV LASFMTYASE HLAMSAFVKG QRGRSKIPER

Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)

001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC

Arabidopsis Description

IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.