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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 7
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400029873 Potato plasma membrane 98.12 98.12
Solyc05g055040.2.1 Tomato plasma membrane 80.3 80.3
VIT_14s0036g00430.t01 Wine grape golgi 75.61 73.81
KRG92718 Soybean endoplasmic reticulum 70.73 69.69
KRG97021 Soybean endoplasmic reticulum 71.48 69.15
KRH68773 Soybean endoplasmic reticulum 71.29 68.97
GSMUA_Achr5P18580_001 Banana plasma membrane 68.29 66.54
GSMUA_Achr11P... Banana plasma membrane 66.6 66.11
AT5G18480.1 Thale cress golgi 66.23 65.74
CDX88935 Canola plasma membrane 65.1 64.98
CDX70822 Canola plasma membrane 64.73 64.85
Bra006462.1-P Field mustard plasma membrane 64.73 64.49
CDY02625 Canola plasma membrane 63.79 63.79
CDY58112 Canola plasma membrane 63.23 63.58
KRH34122 Soybean plasma membrane 61.35 63.37
Bra023678.1-P Field mustard plasma membrane 63.23 63.23
Bra040140.1-P Field mustard extracellular, golgi, plasma membrane 64.73 63.19
CDY29996 Canola extracellular, plasma membrane 64.54 63.0
CDY21129 Canola extracellular, golgi, plasma membrane 64.17 62.64
TraesCS6B01G257400.2 Wheat plasma membrane 55.91 62.08
HORVU2Hr1G089320.8 Barley cytosol 55.91 61.95
EES11117 Sorghum plasma membrane 61.91 61.57
Zm00001d025865_P001 Maize plasma membrane 61.35 61.01
TraesCS2A01G381700.1 Wheat plasma membrane 61.91 61.0
TraesCS2D01G378200.1 Wheat plasma membrane 61.73 60.93
Os02t0624400-01 Rice golgi 62.48 60.88
TraesCS2B01G399000.1 Wheat plasma membrane 61.54 60.74
TraesCS6A01G223900.1 Wheat plasma membrane 61.16 60.26
TraesCS6D01G211500.1 Wheat plasma membrane 60.98 60.07
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 47.65 58.66
Os04t0517400-01 Rice cytosol, plasma membrane 29.08 52.36
Solyc06g060710.2.1 Tomato cytosol 15.01 20.78
Solyc08g078650.2.1 Tomato plasma membrane 18.01 20.47
Solyc11g005760.1.1 Tomato cytosol 18.01 16.87
Solyc01g098960.1.1 Tomato golgi 16.14 15.5
Solyc01g098970.1.1 Tomato golgi 15.95 15.4
Solyc04g064790.2.1 Tomato golgi 18.2 14.97
Solyc04g078980.2.1 Tomato golgi 15.76 14.89
Solyc04g078990.2.1 Tomato golgi 14.82 13.72
Protein Annotations
EnsemblPlants:Solyc04g009920.2.1EnsemblPlantsGene:Solyc04g009920.2Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_8InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPANTHER:PTHR11183PANTHER:PTHR11183:SF65PFAM:PF01501SEG:segSignalP:SignalP-noTM
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0002765C14UniProt:K4BPE7MapMan:5.4.13.2:
Description
Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4BPE7]
Coordinates
chr4:-:3239955..3246719
Molecular Weight (calculated)
60359.9 Da
IEP (calculated)
8.974
GRAVY (calculated)
0.141
Length
533 amino acids
Sequence
(BLAST)
001: MRISFLRFGV LFLLCNCLIG AYCSKSDEAY VTLLYGDEFL LGVRVLGKSI RDTGSTKDMV VLVSDGVSQY AKHLLQADGW IVEKISLLAN PNQVRPKRFW
101: GVYTKLKIFN MTTYKKVVYL DADTIVVKSI EDLFKCGKFC ANLKHSERLN SGVMVVEPSE KVFNDMMSKV TTLPSYTGGD QGFLNSYYVG FANAQVYEPN
201: LPSDVLNSRK VPEMERLSTL YNADVGLYML ANKWMVDEKE LRVIHYTLGP LKPWDWWTSW LLKPVDVWQN VRVQLQESLP GTRGGKNSRD ELLVKFLYLL
301: PLLLIAFCYY RSFLQTQSLW HHIRQMYYKV RGGVLAYASV PPSAISSNQQ FPNGMQLKMP TYLGAVSVCV CFAAALVSLG LPLLIIPRQV MPWTGLLLMY
401: EWTFTLFFLL FGSYLHLVYQ WGRVAANQPG QFPAHPVSLD YEPGKGHQRQ QSCCDNEAWY YGLGMAFLAI AAPALPGVFG VTSLFLRLGL MVVGGLILTS
501: FMTYASEHLS IRSFARGFEE RNTPRSRSVC FLC
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.