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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025865_P001 Maize plasma membrane 95.71 95.71
TraesCS2B01G399000.1 Wheat plasma membrane 86.57 85.93
HORVU2Hr1G089320.8 Barley cytosol 77.05 85.86
TraesCS2A01G381700.1 Wheat plasma membrane 86.57 85.77
TraesCS2D01G378200.1 Wheat plasma membrane 86.38 85.74
Os04t0517400-01 Rice cytosol, plasma membrane 43.1 78.04
GSMUA_Achr5P18580_001 Banana plasma membrane 64.55 63.25
GSMUA_Achr11P... Banana plasma membrane 62.69 62.57
Solyc05g055040.2.1 Tomato plasma membrane 61.75 62.1
Solyc04g009920.2.1 Tomato golgi 61.57 61.91
PGSC0003DMT400029873 Potato plasma membrane 61.57 61.91
VIT_14s0036g00430.t01 Wine grape golgi 62.5 61.36
PGSC0003DMT400060425 Potato plasma membrane 61.01 61.35
Bra006462.1-P Field mustard plasma membrane 59.7 59.81
KRG92718 Soybean endoplasmic reticulum 60.26 59.7
CDX70822 Canola plasma membrane 58.77 59.21
AT5G18480.1 Thale cress golgi 58.96 58.85
KRG97021 Soybean endoplasmic reticulum 60.45 58.8
KRH68773 Soybean endoplasmic reticulum 60.45 58.8
CDX88935 Canola plasma membrane 58.58 58.8
CDY29996 Canola extracellular, plasma membrane 59.33 58.24
CDY58112 Canola plasma membrane 57.46 58.11
Bra040140.1-P Field mustard extracellular, golgi, plasma membrane 58.96 57.88
CDY21129 Canola extracellular, golgi, plasma membrane 58.77 57.69
CDY02625 Canola plasma membrane 57.09 57.41
Bra023678.1-P Field mustard plasma membrane 56.53 56.85
KRH34122 Soybean plasma membrane 51.68 53.68
OQU82100 Sorghum plasma membrane 16.04 20.09
OQU92160 Sorghum golgi, mitochondrion 16.23 17.9
EES01856 Sorghum golgi 18.47 15.64
EER95378 Sorghum golgi, plastid 17.54 15.54
KXG30414 Sorghum mitochondrion 18.66 15.27
EES19558 Sorghum golgi 17.72 15.06
EES03905 Sorghum golgi 16.04 13.67
Protein Annotations
Gene3D:3.90.550.10MapMan:5.4.13.2EntrezGene:8054279UniProt:C5YCD0EnsemblPlants:EES11117ProteinID:EES11117
ProteinID:EES11117.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015020GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016757GO:GO:0046513GO:GO:1990482InterPro:Glyco_trans_8InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183PANTHER:PTHR11183:SF65EnsemblPlantsGene:SORBI_3006G148200SUPFAM:SSF53448
unigene:Sbi.2095SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A86E18RefSeq:XP_002446789.1SEG:seg
Description
hypothetical protein
Coordinates
chr6:+:50981613..50988359
Molecular Weight (calculated)
59888.8 Da
IEP (calculated)
8.903
GRAVY (calculated)
0.137
Length
536 amino acids
Sequence
(BLAST)
001: MRSPALLAAA LVAAVLLAAG AGVAAAATEE AYVTLLYGDE FVLGVRVLGK SLRDTGTRRD MVVLVSDGVS EYSRKLLQAD GWIVNRITLL ANPNQVRPKR
101: FWGVYTKLKI FNMTNYKKVV YLDADTIVVK SIEDLFKCGK FCGNLKHSER MNSGVMVVEP SETLFNDMIN KVGQLPSYTG GDQGFLNSYY SDFANSRVYE
201: PDSPLTPEPE TQRLSTLYNA DVGLYMLANK WMVDEKELRI IHYTLGPLKP WDWFTAWLVK PVETWQDIRQ KLEESLPGTG GGRNPHDQLV VKILFILPFC
301: LLLFGYYQSC FQTNKELISI RSLCAFARRA RHKYKSEESL PSYSVVGSSS VFGISNQRLS NGHLKLPSYF GVIAVLVCFM SAGFSLAFAF IIIPRQVMPW
401: TGLLLMLEWT FVAFFLLFGS YLRFVYRWGS ISANHVGFSN SDASENHMGP GHQRNMSDCD MDATFYWIGM ATIATITVLL PTILGITALF TKLGLMVAGG
501: IVLASFMTYA AEHLAISAFN KGQKDRNASR TRSFCF
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.