CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 5
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, mitochondrion, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047104_P001	Maize	golgi, mitochondrion	95.88	95.49
Zm00001d029920_P001	Maize	mitochondrion	95.06	90.94
HORVU1Hr1G054100.7	Barley	mitochondrion	80.04	86.64
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	84.16	83.3
Os10t0555100-01	Rice	golgi, plasma membrane	83.74	82.72
TraesCS1D01G214700.1	Wheat	golgi	82.92	82.58
TraesCS1B01G225300.1	Wheat	golgi	81.69	76.64
OQU82100	Sorghum	plasma membrane	62.96	71.5
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	63.37	71.46
GSMUA_Achr5P20900_001	Banana	plasma membrane	62.35	70.3
GSMUA_Achr11P...	Banana	cytosol	62.35	70.3
GSMUA_Achr5P15460_001	Banana	cytosol	62.14	70.07
GSMUA_Achr5P13360_001	Banana	cytosol	60.08	67.75
KRH77365	Soybean	cytosol, peroxisome	45.47	66.97
GSMUA_Achr1P01490_001	Banana	cytosol	58.64	66.13
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	51.44	65.44
Solyc06g060710.2.1	Tomato	cytosol	50.82	64.16
KRH28078	Soybean	plasma membrane	61.32	63.14
CDY32093	Canola	cytosol	55.56	62.79
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	54.94	62.53
KRH57402	Soybean	extracellular, golgi, plasma membrane	61.32	62.47
PGSC0003DMT400030982	Potato	plasma membrane	59.67	62.37
Solyc08g078650.2.1	Tomato	plasma membrane	59.88	62.05
KRH04125	Soybean	plasma membrane	60.49	61.76
PGSC0003DMT400012126	Potato	plasma membrane	59.88	61.13
AT4G16600.1	Thale cress	plasma membrane	59.47	58.5
Bra017301.1-P	Field mustard	plasma membrane	58.44	57.49
Bra005312.1-P	Field mustard	plasma membrane	58.23	57.29
CDX84174	Canola	plasma membrane	58.02	57.09
AT2G35710.1	Thale cress	plasma membrane	58.23	56.94
CDY40445	Canola	plasma membrane	57.82	56.88
Bra038490.1-P	Field mustard	plasma membrane	56.79	56.56
CDY40528	Canola	plasma membrane	48.35	42.34
EES11117	Sorghum	plasma membrane	17.9	16.23
EER95378	Sorghum	golgi, plastid	15.64	12.56
EES03905	Sorghum	golgi	15.64	12.08
EES01856	Sorghum	golgi	15.23	11.69
EES19558	Sorghum	golgi	14.61	11.25
KXG30414	Sorghum	mitochondrion	14.61	10.84

Protein Annotations

EnsemblPlants:OQU92160	EnsemblPlantsGene:SORBI_3001G302200	EntrezGene:8058099	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF60	ProteinID:EER94513.1
ProteinID:OQU92160	ProteinID:OQU92160.1	RefSeq:XP_002467515.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448
TMHMM:TMhelix	unigene:Sbi.15801	UniParc:UPI0001A82FA8	UniProt:C5WSG9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:-:58466713..58471753

Molecular Weight (calculated)

55486.2 Da

IEP (calculated)

8.051

GRAVY (calculated)

0.201

Length

486 amino acids

Sequence
(BLAST)

001: MAGLPPVARR RPLATASLLL LLLLAVTAAA REERGLAARR VEGPPPRHRH AYAAMMYMGT PRDYEFYVAV RVMMRSLTRV QADADRVLIA SADVPRDWVR
101: AMTEEDGLRV VIVENLRNPY EGNLGGINKR FKLTLNKLYA WTLVDYERVV MIDSDNIFLQ NTDELFQCGQ FCAVFINPCY FHTGLFVLQP SIDVFKGMLH
201: DLETGRENSD GADQGFLVGC YPDLLDKPMF HPPENGTKLN GTYRLPLGYQ MDASYYYLKL HWHVPCGPNS VITFPSAPWF KPWYWWSWPV LPLGLSWHKQ
301: RWDDLGYAAE MPVVLMEVLM YIVIITVTRL ARPGMTKLCY NRRPEKQSAL VQWLIKLAAI VAMVAAYSIP FFVIPRTVHP IMGWSIYLFG ALALSVLVIN
401: VFLLPPLDVL TTWLAIVGML FVMAFPWYHD GVVRALAVFG YAFCSAPFLW ASMVRMMDSV QTMLERDPFF PRIGEPAQET EFSKLF

Best Arabidopsis Sequence Match ( AT4G16600.1 )
(BLAST)

001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY

Arabidopsis Description

PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.