Factsheet for VIT_00s2563g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77365	Soybean	cytosol, peroxisome	62.83	72.73
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	74.87	66.36
GSMUA_Achr11P...	Banana	cytosol	73.56	65.2
GSMUA_Achr5P20900_001	Banana	plasma membrane	71.99	63.81
OQU82100	Sorghum	plasma membrane	71.2	63.55
CDY32093	Canola	cytosol	70.94	63.02
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	69.37	62.06
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	72.25	62.02
HORVU2Hr1G097240.1	Barley	cytosol, mitochondrion, plasma membrane	71.2	61.68
GSMUA_Achr5P15460_001	Banana	cytosol	68.85	61.02
Solyc08g078650.2.1	Tomato	plasma membrane	73.82	60.13
KRH57402	Soybean	extracellular, golgi, plasma membrane	74.87	59.96
KRH04125	Soybean	plasma membrane	74.35	59.66
KRH28078	Soybean	plasma membrane	73.56	59.53
GSMUA_Achr5P13360_001	Banana	cytosol	67.02	59.4
PGSC0003DMT400012126	Potato	plasma membrane	73.82	59.24
GSMUA_Achr1P01490_001	Banana	cytosol	66.75	59.16
TraesCS2A01G412200.1	Wheat	plasma membrane	71.73	58.17
TraesCS2B01G430800.1	Wheat	plasma membrane	71.47	58.09
TraesCS2D01G409400.1	Wheat	plasma membrane	71.73	57.93
Zm00001d002725_P001	Maize	plasma membrane	70.94	57.78
HORVU1Hr1G054100.7	Barley	mitochondrion	64.92	55.23
AT4G16600.1	Thale cress	plasma membrane	70.94	54.86
Bra017301.1-P	Field mustard	plasma membrane	70.94	54.86
AT2G35710.1	Thale cress	plasma membrane	70.94	54.53
CDY40445	Canola	plasma membrane	70.42	54.45
Bra005312.1-P	Field mustard	plasma membrane	70.42	54.45
Bra038490.1-P	Field mustard	plasma membrane	69.37	54.3
CDX84174	Canola	plasma membrane	70.16	54.25
TraesCS1D01G214700.1	Wheat	golgi	65.97	51.64
OQU92160	Sorghum	golgi, mitochondrion	65.44	51.44
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	65.44	50.92
Zm00001d047104_P001	Maize	golgi, mitochondrion	64.66	50.61
Os10t0555100-01	Rice	golgi, plasma membrane	64.14	49.8
Zm00001d029920_P001	Maize	mitochondrion	65.71	49.41
Zm00001d026165_P003	Maize	plasma membrane	61.26	48.95
TraesCS1B01G225300.1	Wheat	golgi	64.66	47.68
CDY40528	Canola	plasma membrane	69.11	47.57
VIT_14s0036g00430.t01	Wine grape	golgi	20.16	14.1
VIT_14s0128g00420.t01	Wine grape	golgi	13.35	9.34
VIT_04s0044g00990.t01	Wine grape	golgi	15.45	9.28
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	15.45	9.19
VIT_18s0001g10580.t01	Wine grape	golgi	12.83	8.31

Protein Annotations

EntrezGene:100264305	wikigene:100264305	Gene3D:3.90.550.10	MapMan:35.1	EMBL:AM463479	ProteinID:CAN77033
ProteinID:CAN77033.1	ProteinID:CBI18858	ProteinID:CBI18858.3	UniProt:D7ST65	EMBL:FN595184	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	EntrezGene:LOC100264305	wikigene:LOC100264305	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR11183	PANTHER:PTHR11183:SF93	SUPFAM:SSF53448	TIGR:TC69216	TMHMM:TMhelix	UniParc:UPI0001BE1749
ArrayExpress:VIT_00s2563g00010	EnsemblPlantsGene:VIT_00s2563g00010	EnsemblPlants:VIT_00s2563g00010.t01	unigene:Vvi.760	RefSeq:XP_002269578	RefSeq:XP_002269578.2

Description

No Description!

Coordinates

chrUn:-:42361889..42363598

Molecular Weight (calculated)

43630.6 Da

IEP (calculated)

8.447

GRAVY (calculated)

0.206

Length

382 amino acids

Sequence
(BLAST)

001: EQEDGAKVVR VKNMNNPYKN QDHFDMRFKL TLNKLYAWSL VDYDRVIMLD SDNLFLQKTD ELFQCGQFCA VFINPCIFHT GLFVLQPSME VFRSMLHELA
101: IGRENRDGAD QGFLASYFPD LLDQPMFHQP PNATKLDGNY RLPLGYQMDA SYYYLKLRWT IPCGPNSVIT FPSAPWLKPW YWWSWPVLPL GLSWHRQRLQ
201: TLGYNAEMPV VLMQWIVYLG VIAMARLARS NLSKLCYRRV EKSSSSIQTG LKLLTLWSIV AAYVLPFFLI PRTVHPLLGW TLYLVGSFAL SSIAMNAFLL
301: PMLAVLTPGL GILGALLVMA FPWYPDGVVR ALVVFAYAFC CAPIAWTSLV KIMTCHQVSP EKEVFFPKLG DSQPSPDPIK LC

Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)

001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY

Arabidopsis Description

PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.