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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 6
  • plasma membrane 7
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017301.1-P Field mustard plasma membrane 98.79 98.79
CDY32093 Canola cytosol 85.22 97.91
CDX84174 Canola plasma membrane 92.92 92.92
AT2G35710.1 Thale cress plasma membrane 91.5 90.95
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 68.02 78.69
VIT_00s2563g00010.t01 Wine grape cytosol, plasma membrane 54.45 70.42
GSMUA_Achr8P11090_001 Banana cytosol, mitochondrion, plasma membrane, plastid 61.13 70.07
GSMUA_Achr11P... Banana cytosol 60.53 69.37
GSMUA_Achr5P20900_001 Banana plasma membrane 59.92 68.68
GSMUA_Achr5P13360_001 Banana cytosol 59.72 68.45
GSMUA_Achr5P15460_001 Banana cytosol 59.72 68.45
OQU82100 Sorghum plasma membrane 58.91 67.99
KRH77365 Soybean cytosol, peroxisome 45.34 67.88
Solyc08g078650.2.1 Tomato plasma membrane 64.17 67.59
PGSC0003DMT400012126 Potato plasma membrane 64.98 67.44
KRH28078 Soybean plasma membrane 64.37 67.37
GSMUA_Achr1P01490_001 Banana cytosol 58.3 66.82
HORVU2Hr1G097240.1 Barley cytosol, mitochondrion, plasma membrane 59.11 66.21
Os04t0553800-01 Rice cytosol, mitochondrion, plastid 59.11 65.62
KRH57402 Soybean extracellular, golgi, plasma membrane 62.55 64.78
KRH04125 Soybean plasma membrane 62.35 64.71
TraesCS2B01G430800.1 Wheat plasma membrane 60.73 63.83
Zm00001d002725_P001 Maize plasma membrane 60.32 63.54
TraesCS2D01G409400.1 Wheat plasma membrane 60.53 63.21
TraesCS2A01G412200.1 Wheat plasma membrane 60.12 63.06
HORVU1Hr1G054100.7 Barley mitochondrion 54.66 60.13
OQU92160 Sorghum golgi, mitochondrion 56.88 57.82
Zm00001d047104_P001 Maize golgi, mitochondrion 56.48 57.17
TraesCS1D01G214700.1 Wheat golgi 55.47 56.15
TraesCS1A01G211500.1 Wheat golgi, plasma membrane 55.67 56.01
Os10t0555100-01 Rice golgi, plasma membrane 55.47 55.69
Zm00001d026165_P003 Maize plasma membrane 53.85 55.65
Zm00001d029920_P001 Maize mitochondrion 57.09 55.51
CDY40528 Canola plasma membrane 60.32 53.69
TraesCS1B01G225300.1 Wheat golgi 54.86 52.32
CDX88935 Canola plasma membrane 19.23 17.79
CDX70822 Canola plasma membrane 19.03 17.67
CDY58112 Canola plasma membrane 18.83 17.55
CDY02625 Canola plasma membrane 18.83 17.45
CDY29996 Canola extracellular, plasma membrane 18.22 16.48
CDY21129 Canola extracellular, golgi, plasma membrane 18.02 16.3
CDX75345 Canola golgi, plastid 15.18 12.44
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 14.78 12.33
CDX68968 Canola golgi 14.78 12.05
CDY32144 Canola endoplasmic reticulum, golgi 13.56 11.96
CDY53768 Canola plastid 15.79 11.82
CDY38364 Canola extracellular, golgi 13.16 11.71
CDY18535 Canola plastid 15.59 11.67
CDY06343 Canola golgi 12.96 11.66
CDY41730 Canola endoplasmic reticulum, golgi 12.96 11.49
CDX95254 Canola golgi 12.75 11.31
CDY22652 Canola golgi 12.96 11.29
CDY31118 Canola golgi 12.96 11.27
CDY32143 Canola golgi 12.96 11.27
CDX92257 Canola plastid 13.97 10.97
CDY04633 Canola golgi, mitochondrion, peroxisome 14.17 10.95
CDY13574 Canola plastid 10.12 10.8
CDY28291 Canola nucleus 4.66 9.96
CDX96589 Canola golgi, peroxisome, plasma membrane 12.15 9.71
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 11.74 9.4
CDY28292 Canola golgi 12.96 8.66
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 14.57 6.96
CDX99330 Canola cytosol 1.62 5.56
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-Gene3D:3.90.550.10MapMan:35.1GO:A0A078HPG7
UniProt:A0A078HPG7InterPro:Alpha_mannosyltransferaseEnsemblPlants:CDY40445ProteinID:CDY40445ProteinID:CDY40445.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005975GO:GO:0006464GO:GO:0006486GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016757GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00069663001InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPFAM:PF11051
PANTHER:PTHR11183PANTHER:PTHR11183:SF93SUPFAM:SSF53448SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00378
UniParc:UPI0004EDEAC2SEG:seg::::
Description
BnaA04g20720DBnaA04g20720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPG7]
Coordinates
chrLK032470:+:183025..186674
Molecular Weight (calculated)
56630.3 Da
IEP (calculated)
8.140
GRAVY (calculated)
0.216
Length
494 amino acids
Sequence
(BLAST)
001: MDMHRGLVLL CCVLSLLVIE TTAYRERQLL QLHETTVDTT NTAVAVRDRG LKTRRPEHKN AYATMMYMGT PRDYEFYVAT RVLIRSLRDL NVEADLVVIA
101: SLDVPLRWVE TLEEEDGAKV VRVENVDNPY RRQTNFNSRF KLTLNKLYAW ALSDYDRVVM LDADNLFLEK TDELFQCGRF CAVFINPCIF HTGLFVLQPS
201: LEVFKDMLHE LQVGRENRDG ADQGFLVSYF SDLLDQPLFR PPSNGSVLSG HLRLPLGYQM DASYFYLKLR WNIPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGFSWHEQR RTTVGYSAEM PLAIIQTMFY LGIIVVTRLA RPNITKLCYR RSDRNLTTIQ AGFKFIALLS VVAAYVFPFF TIPHTIHPLI GWSLYLMASF
401: ALSSIPINTL LLPTLPVLTP WIGILGTLLV MAFHWYPDGV VRALSVFGYA FCCAPFVWVA FLKITSHLQV LIEKEVLFPR LGDSGITSGF SKLY
Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)
001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY
Arabidopsis Description
PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.