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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034558.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 98.65 98.65
CDX75345 Canola golgi, plastid 91.55 89.88
CDX68968 Canola golgi 90.71 88.61
AT4G33330.2 Thale cress endoplasmic reticulum, golgi, plastid 86.32 81.63
KRH15352 Soybean golgi 64.36 64.14
KRH05688 Soybean golgi 63.51 63.51
CDY28292 Canola golgi 79.05 63.33
VIT_18s0001g10580.t01 Wine grape golgi 62.67 62.88
Solyc04g078990.2.1 Tomato golgi 60.14 61.81
KRH61283 Soybean golgi 61.49 61.18
PGSC0003DMT400020680 Potato golgi 59.63 60.97
Solyc04g078980.2.1 Tomato golgi 56.42 59.22
CDY28291 Canola nucleus 22.97 58.87
PGSC0003DMT400020678 Potato golgi 56.08 58.87
Zm00001d027938_P001 Maize plasma membrane 50.84 50.76
TraesCS4B01G301200.1 Wheat golgi 50.68 50.59
TraesCS4D01G299500.1 Wheat golgi 50.17 49.92
TraesCS4A01G004100.1 Wheat golgi 49.83 49.83
EER95378 Sorghum golgi, plastid 50.17 49.09
Os03t0184300-02 Rice golgi 50.68 48.86
GSMUA_Achr6P10110_001 Banana endoplasmic reticulum 42.4 47.81
GSMUA_Achr3P01740_001 Banana endoplasmic reticulum, golgi 43.24 46.89
GSMUA_Achr2P22380_001 Banana extracellular, golgi, plastid 46.45 46.45
CDY41730 Canola endoplasmic reticulum, golgi 42.23 44.88
CDX95254 Canola golgi 42.06 44.7
CDY32144 Canola endoplasmic reticulum, golgi 41.05 43.39
CDY32143 Canola golgi 41.22 42.96
CDY06343 Canola golgi 39.7 42.81
CDY31118 Canola golgi 41.05 42.78
CDY22652 Canola golgi 40.71 42.5
CDY18535 Canola plastid 43.41 38.94
CDY53768 Canola plastid 43.41 38.94
CDY04633 Canola golgi, mitochondrion, peroxisome 41.39 38.34
CDY38364 Canola extracellular, golgi 35.14 37.48
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 39.02 37.44
CDX96589 Canola golgi, peroxisome, plasma membrane 39.02 37.38
CDX92257 Canola plastid 38.85 36.57
CDY13574 Canola plastid 27.2 34.77
CDX99330 Canola cytosol 8.45 34.72
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 41.39 23.67
CDY58112 Canola plasma membrane 15.88 17.74
CDY02625 Canola plasma membrane 15.71 17.45
CDX88935 Canola plasma membrane 14.86 16.48
CDX70822 Canola plasma membrane 14.7 16.35
CDY29996 Canola extracellular, plasma membrane 14.7 15.93
CDY21129 Canola extracellular, golgi, plasma membrane 14.36 15.57
CDY40445 Canola plasma membrane 12.33 14.78
CDX84174 Canola plasma membrane 12.16 14.57
CDY32093 Canola cytosol 10.47 14.42
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 10.14 14.05
CDY40528 Canola plasma membrane 9.29 9.91
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-MapMan:21.2.2.1.2.1Gene3D:3.90.550.10GO:A0A078I4U6
UniProt:A0A078I4U6EnsemblPlants:CDY45037ProteinID:CDY45037ProteinID:CDY45037.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009834GO:GO:0009987GO:GO:0015020
GO:GO:0016740GO:GO:0016757GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00081289001InterPro:GUXInterPro:Glyco_trans_8
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183PANTHER:PTHR11183:SF44SUPFAM:SSF53448
TMHMM:TMhelixUniParc:UPI0004EEC0DCSEG:seg:::
Description
BnaA08g11820DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078I4U6]
Coordinates
chrLK032611:-:177681..182829
Molecular Weight (calculated)
69655.0 Da
IEP (calculated)
9.110
GRAVY (calculated)
-0.373
Length
592 amino acids
Sequence
(BLAST)
001: MMMVMKIAPS KSTLIRFNLI LFALSFLLYT AFSLSPSSSV YFRSAASFVG CSFRHCTPKV TRGVKMQELI VENQINKIGL QIASNQTKLE APSFMEEILT
101: RGLGKTKIGM VNMEEADLTQ WKRYGETNHI HFDRVSKLFT WHDLFPEWID EEEDHEVPTC PEIPMPDLER LEKFDLIVVK LPCKYPEEGW RREVLRLQVN
201: LVAANLVAKK GKTDWTWKSK VLFWSKCQPM IEIFRCDDLE KREGDWWLYR PEVVRLQQKV SLPIGSCNLA LPLWAPQGID KVYDLTKIKA ETRRPKREAY
301: ATVLHSSESY VCGAITLAQS LLKTNTKRDL ILLHDDSISI TKLQALAAVG WKLRRILRIR NPLAEKDSYN EYNYSKFRLW QLTDYDKVVF IDADIIVLLN
401: LDLLFHFPQM SATGNDVWIF NSGVMVIEPS NCTFSTIMSQ RNDIVSYNGG DQGYLNEIFV WWHRLPRRVN FLKNFWSNTT NERNIKNSLF AAEPPQLYAV
501: HYLGWKPWLC YRDYDCNFDV EQHVYASDAA HARWWKVHDA MDEDLERFCR LTKKRRTELN WERRRSRRRG STDFHWRINV TDPRRRRSYL IG
Best Arabidopsis Sequence Match ( AT4G33330.1 )
(BLAST)
001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR RSYLIG
Arabidopsis Description
PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.