Factsheet for Bra034558.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 4
endoplasmic reticulum 3
nucleus 1
extracellular 2
vacuole 2
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	98.65	98.65
Bra011433.1-P	Field mustard	golgi	91.39	91.69
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	85.98	81.31
KRH15352	Soybean	golgi	64.36	64.14
KRH05688	Soybean	golgi	63.51	63.51
CDY28292	Canola	golgi	79.22	63.46
VIT_18s0001g10580.t01	Wine grape	golgi	62.5	62.71
Solyc04g078990.2.1	Tomato	golgi	59.97	61.63
KRH61283	Soybean	golgi	61.49	61.18
PGSC0003DMT400020680	Potato	golgi	59.46	60.79
Solyc04g078980.2.1	Tomato	golgi	56.25	59.04
CDY28291	Canola	nucleus	22.97	58.87
PGSC0003DMT400020678	Potato	golgi	55.91	58.69
Zm00001d027938_P001	Maize	plasma membrane	50.84	50.76
TraesCS4B01G301200.1	Wheat	golgi	50.68	50.59
TraesCS4D01G299500.1	Wheat	golgi	50.17	49.92
TraesCS4A01G004100.1	Wheat	golgi	49.83	49.83
EER95378	Sorghum	golgi, plastid	50.17	49.09
Os03t0184300-02	Rice	golgi	50.51	48.7
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	42.57	48.0
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	43.41	47.07
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	46.11	46.11
Bra027954.1-P	Field mustard	golgi	41.72	45.4
Bra031653.1-P	Field mustard	cytosol	40.37	45.27
Bra030750.1-P	Field mustard	plastid	39.19	44.11
Bra037570.1-P	Field mustard	plastid	43.24	38.79
Bra008292.1-P	Field mustard	extracellular, plasma membrane	35.3	37.66
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	38.85	37.4
Bra022342.1-P	Field mustard	plastid	38.85	36.51
CDX99330	Canola	cytosol	8.45	34.72
Bra017919.1-P	Field mustard	cytosol	41.22	23.67
Bra023678.1-P	Field mustard	plasma membrane	15.2	16.89
Bra006462.1-P	Field mustard	plasma membrane	14.86	16.45
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	14.19	15.38
Bra017301.1-P	Field mustard	plasma membrane	12.33	14.78
Bra005312.1-P	Field mustard	plasma membrane	11.99	14.37
Bra038490.1-P	Field mustard	plasma membrane	11.66	14.14
Bra015632.1-P	Field mustard	extracellular	9.8	13.88

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra034558	EnsemblPlants:Bra034558.1	EnsemblPlants:Bra034558.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492	InterPro:GUX	InterPro:Glyco_trans_8
InterPro:IPR029044	UniProt:M4F0G4	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002546782	SEG:seg	:	:

Description

AT4G33330 (E=2e-311) PGSIP3 | transferase, transferring glycosyl groups

Coordinates

chrA08:+:12831221..12834574

Molecular Weight (calculated)

69657.0 Da

IEP (calculated)

9.374

GRAVY (calculated)

-0.382

Length

592 amino acids

Sequence
(BLAST)

001: MMMVMKIAPS KSTLIRFNLI LFALSFLLYT AFSLSPSSSV YFRSAASFVG CSFRHCTPKV TRGVKMQELI VENQINKIGS QIASNQTKLE APSFMEEILT
101: RGLGKTKIGM VNMEEADLTQ WKRYGETNHI HFDRVSKLFT WHDLFPEWID EEEDHEVPTC PEIPMPDLER LEKFDLIVVK LPCKYPEEGW RREVLRLQVN
201: LVAANLVAKK GKTDWTWKSK VLFWSKCQPM IEIFRCDDME KREGNWWLYR PEVVRLQQKV SLPIGSCNLA LPLWAPQGID KVYDLTKIKA ETRRPKREAY
301: ATVLHSSESY VCGAITLAQS LLKTNTKRDL ILLHDDSISI TKLRALAAAG WKLRRILRIR NPLAEKDSYN EYNYSKFRLW QLTDYDKVVF IDADIIVLLN
401: LDLLFHFPQM SATGNDVWIF NSGVMVIEPS NCTFSTIMSL RNDIVSYNGG DQGYLNEIFV WWHRLPRRVN FLKNFWSNTT NERNIKNSLF AAEPPQLYAV
501: HYLGWKPWLC YRDYDCNFDV EQHVYANDAA HARWWKVHDA MDEDLQRFCR LTKKRRTELN WERRRSRRRG STDFHWRINV TDPRRRRSYL IG

Best Arabidopsis Sequence Match ( AT4G33330.1 )
(BLAST)

001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR RSYLIG

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.