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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88935 Canola plasma membrane 96.82 97.0
CDX70822 Canola plasma membrane 96.26 96.8
Bra023678.1-P Field mustard plasma membrane 88.97 89.31
AT5G18480.1 Thale cress golgi 86.73 86.41
Bra040140.1-P Field mustard extracellular, golgi, plasma membrane 80.93 79.3
VIT_14s0036g00430.t01 Wine grape golgi 68.22 66.85
KRG97021 Soybean endoplasmic reticulum 67.66 65.7
KRG92718 Soybean endoplasmic reticulum 66.17 65.43
KRH68773 Soybean endoplasmic reticulum 67.1 65.15
Solyc04g009920.2.1 Tomato golgi 64.49 64.73
Solyc05g055040.2.1 Tomato plasma membrane 64.3 64.54
PGSC0003DMT400029873 Potato plasma membrane 63.93 64.17
PGSC0003DMT400060425 Potato plasma membrane 63.36 63.6
GSMUA_Achr11P... Banana plasma membrane 62.43 62.2
GSMUA_Achr5P18580_001 Banana plasma membrane 63.55 62.16
KRH34122 Soybean plasma membrane 58.69 60.85
EES11117 Sorghum plasma membrane 59.81 59.7
Zm00001d025865_P001 Maize plasma membrane 59.63 59.51
HORVU2Hr1G089320.8 Barley cytosol 53.27 59.25
TraesCS2A01G381700.1 Wheat plasma membrane 58.88 58.23
TraesCS2B01G399000.1 Wheat plasma membrane 58.69 58.15
TraesCS2D01G378200.1 Wheat plasma membrane 58.5 57.96
Os02t0624400-01 Rice golgi 59.25 57.95
TraesCS6B01G257400.2 Wheat plasma membrane 51.78 57.71
TraesCS6D01G211500.1 Wheat plasma membrane 57.57 56.93
TraesCS6A01G223900.1 Wheat plasma membrane 56.64 56.01
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 43.93 54.27
Os04t0517400-01 Rice cytosol, plasma membrane 26.54 47.97
Bra038490.1-P Field mustard plasma membrane 18.13 19.88
Bra005312.1-P Field mustard plasma membrane 17.76 19.23
Bra017301.1-P Field mustard plasma membrane 17.38 18.83
Bra030750.1-P Field mustard plastid 17.01 17.3
Bra031653.1-P Field mustard cytosol 17.01 17.23
Bra027954.1-P Field mustard golgi 17.01 16.73
Bra008292.1-P Field mustard extracellular, plasma membrane 16.07 15.5
Bra011433.1-P Field mustard golgi 16.45 14.92
Bra034558.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 16.45 14.86
Bra016419.1-P Field mustard golgi, peroxisome, plasma membrane 16.45 14.31
Bra037570.1-P Field mustard plastid 17.2 13.94
Bra022342.1-P Field mustard plastid 15.14 12.86
Bra017919.1-P Field mustard cytosol 20.0 10.38
Bra015632.1-P Field mustard extracellular 3.55 4.55
Protein Annotations
Gene3D:3.90.550.10MapMan:5.4.13.2EnsemblPlantsGene:Bra006462EnsemblPlants:Bra006462.1EnsemblPlants:Bra006462.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757
InterPro:Glyco_trans_8InterPro:IPR029044UniProt:M4CQH3InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183
PANTHER:PTHR11183:SF65SUPFAM:SSF53448SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000253FE69SEG:seg
Description
AT5G18480 (E=6e-248) PGSIP6 | PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups
Coordinates
chrA03:-:3592002..3594300
Molecular Weight (calculated)
60290.7 Da
IEP (calculated)
9.055
GRAVY (calculated)
0.140
Length
535 amino acids
Sequence
(BLAST)
001: MLRDKASLCV LLFSILLLFK GSFGSESRSK EAYVTLLYGD EFLLGVRVLG KSIRDTGSDK YMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIDDLFKCS KFCANLKHSE RLNSGVMVVE PSQALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFQNARVF
201: DPSLSHEELK ARPVPDMERL STLYNADVGL YMLANKWMVD ESKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGKN QNDELVVKLL
301: FLLPLCALLF CIYRSIQGYE GSLCSQFRYL YYKIRSNRTL GYSGVSTFST MNPSHQLHNG NSQSKVPQHL GAVSVVVCFT AVLISVGVSF MIVPRQIMPW
401: TGLILVYEWT FTIFFLLFGC FLLLVHQHGK KIAVHTESSS LDDSGKGHQR GGVSCDVTTL YYGLGMVFLA IATVSLPYIL GITALFVRLG LMVGVAIVLA
501: AYMTYASEHL AIRWFLKGLE DRRETSRSKS ICFMC
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.