Factsheet for Bra015632.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	16.03	10.89
Bra027954.1-P	Field mustard	golgi	13.88	10.66
Bra011433.1-P	Field mustard	golgi	14.83	10.51
Bra037570.1-P	Field mustard	plastid	16.51	10.45
Bra031653.1-P	Field mustard	cytosol	13.16	10.42
Bra030750.1-P	Field mustard	plastid	12.68	10.08
Bra022342.1-P	Field mustard	plastid	15.07	10.0
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	13.88	9.8
Bra008292.1-P	Field mustard	extracellular, plasma membrane	12.44	9.37
Bra017919.1-P	Field mustard	cytosol	16.03	6.5
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	5.74	4.4
Bra023678.1-P	Field mustard	plasma membrane	5.5	4.32
Bra038490.1-P	Field mustard	plasma membrane	5.02	4.3
Bra005312.1-P	Field mustard	plasma membrane	5.02	4.25
Bra017301.1-P	Field mustard	plasma membrane	5.02	4.25
Bra006462.1-P	Field mustard	plasma membrane	4.55	3.55

Protein Annotations

EnsemblPlants:Bra015632.1	EnsemblPlants:Bra015632.1-P	EnsemblPlantsGene:Bra015632	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0002541B7F
UniProt:M4DGK7	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrA07:-:21647947..21649203

Molecular Weight (calculated)

45207.3 Da

IEP (calculated)

8.037

GRAVY (calculated)

0.240

Length

418 amino acids

Sequence
(BLAST)

001: MYSLFFFVVF NICTRTVVVS HAAAPLDPLV ITFSPPIQDT TASHVPLLAT THPLRASSPS LVMPSVSSFI VLAALPFMLV SAGSSDGSNS LVSSTSMKTT
101: GGPGVSSSEG HCCSSVLRNL HNDCSSVWNI SSESWISRLK DPRWVQLHPS TSTSLPLPFI AANEKSTAVL FSHRQGGAVT TTTLSSLLRC FLILIFKPLT
201: PSSEQVTLRR EVAPPPQRFV PPTPRCELTG DFDTALQRRD ASFTPPFWAW ALNSKGSSPF HDPKGLSSDL PPQSYPTSFS RFVSKSNIPM ELEMTTVSTV
301: SPNNMLSGTV EIHLVSRIIA DIVCLMDCIV TSSFSMSSSV LVFTNDFQTR SLGSPLIGSC TDFSVFLGAS VLGFQVKFVS GYLRPLNTSI FYCCTFRFHL
401: AVEFTSGCSH LKPAGHLV

Best Arabidopsis Sequence Match ( AT3G47000.3 )
(BLAST)

001: MVVEESSCVY KNGDAPVEAR VKDLLSRMTL PEKIGQMTQI ERRVASPSAF TDFFIGSVLN AGGSVPFEDA KSSDWADMID GFQRSALASR LGIPIIYGTD
101: AVHGNNNVYG ATVFPHNIGL GATRDADLVR RIGAATALEV RASGVHWAFS PCVAVLRDPR WGRCYESYGE DPELVCEMTS LVSGLQGVPP EEHPNGYPFV
201: AGRNNVVACV KHFVGDGGTD KGINEGNTIA SYEELEKIHI PPYLKCLAQG VSTVMASYSS WNGTRLHADR FLLTEILKEK LGFKGFLVSD WEGLDRLSEP
301: QGSNYRYCIK TAVNAGIDMV MVPFKYEQFI QDMTDLVESG EIPMARINDA VERILRVKFV AGLFGHPLTD RSLLPTVGCK EHRELAQEAV RKSLVLLKSG
401: KNADKPFLPL DRNAKRILVT GTHADDLGYQ CGGWTKTWFG LSGRITIGN

Arabidopsis Description

At3g47000 [Source:UniProtKB/TrEMBL;Acc:Q9SD73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.