Factsheet for Bra027954.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 7
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, extracellular, golgi, mitochondrion, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41730	Canola	endoplasmic reticulum, golgi	99.08	96.77
CDX95254	Canola	golgi	98.35	96.05
AT1G54940.1	Thale cress	golgi	79.78	77.92
Bra031653.1-P	Field mustard	cytosol	67.65	69.7
Bra030750.1-P	Field mustard	plastid	65.62	67.87
VIT_14s0128g00420.t01	Wine grape	golgi	52.94	52.75
PGSC0003DMT400048888	Potato	nucleus	47.61	51.39
Solyc01g098960.1.1	Tomato	golgi	49.63	48.65
KRG96838	Soybean	golgi	49.45	48.64
Solyc01g098970.1.1	Tomato	golgi	47.24	46.56
PGSC0003DMT400048884	Potato	golgi	46.88	45.95
KRH33949	Soybean	plastid	47.98	45.55
KRH68559	Soybean	cytosol	29.04	44.51
Bra011433.1-P	Field mustard	golgi	45.77	42.2
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	45.4	41.72
Bra008292.1-P	Field mustard	extracellular, plasma membrane	35.85	35.14
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	38.24	33.82
Bra037570.1-P	Field mustard	plastid	40.81	33.64
Bra022342.1-P	Field mustard	plastid	36.95	31.9
Bra017919.1-P	Field mustard	cytosol	39.15	20.66
Bra023678.1-P	Field mustard	plasma membrane	16.73	17.07
Bra006462.1-P	Field mustard	plasma membrane	16.73	17.01
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	15.99	15.93
Bra015632.1-P	Field mustard	extracellular	10.66	13.88
Bra017301.1-P	Field mustard	plasma membrane	11.95	13.16
Bra005312.1-P	Field mustard	plasma membrane	11.95	13.16
Bra038490.1-P	Field mustard	plasma membrane	11.03	12.3

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra027954	EnsemblPlants:Bra027954.1	EnsemblPlants:Bra027954.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0015020	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	UniProt:M4EGP0
InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF51	SUPFAM:SSF53448	SignalP:SignalP-noTM
UniParc:UPI0002542225	SEG:seg	:	:	:	:

Description

AT1G54940 (E=3e-254) PGSIP4 | PGSIP4 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 4); transferase, transferring glycosyl groups

Coordinates

chrA09:-:10086102..10088557

Molecular Weight (calculated)

62690.3 Da

IEP (calculated)

8.370

GRAVY (calculated)

-0.324

Length

544 amino acids

Sequence
(BLAST)

001: MVYLILISLS LVGLIVSFKP FSISNQIITS PSSSDIRIDL PAPVVSKNPR WLRLVRDYLP AKKLRIGFLN IEEQERESFE ANGPSIMENV HVSLDPLPVS
101: LTWNSLFPEW IDEENSQCPE IPLPKPEGSS ADVDVIVAKV PCDGWSENKG LRDVFRLQVN LAAANLAVKS GLTKVDSTVY VVFVGSCGPM HEIFKCDERV
201: RRVDDYWVYK PNLPRLKQKL LMPVGSCHVA SPFAQLGQEA WRPKNKDNLT SVAIRKHRVA YVTVLHSSEA YVCGAIALAQ SIRQSGSNKD MILLHDRSIT
301: NRSLIGLSSA GWNLRLIDRI RSPFAEKDSY NEWNYSKLRV WQVTDYDKLL FIDADFIVVK KLDHLFYYPQ FSAAGNDKVL FNSGIMIVEP SACLFKDLME
401: KSSKIESYNG GDQGFLNEIF VWWHRLSKRV NTMKYFDENF KGTRDLPDDL EGVHYLGLKP WVCYRDYDCN WDMSLRRVFA SDSVHEKWWK VYDKMSEQLK
501: GYCGLNKKMK YRIEKWRKIA ENDSLPDRHW EIEVKDPRKN NLVQ

Best Arabidopsis Sequence Match ( AT1G54940.1 )
(BLAST)

001: MGTKTHNSRG KIFMIYLILV SLSLLGLILP FKPLFRITSP SSTLRIDLPS PQVNKNPKWL RLIRNYLPEK RIQVGFLNID EKERESYEAR GPLVLKNIHV
101: PLDHIPKNVT WKSLYPEWIN EEASTCPEIP LPQPEGSDAN VDVIVARVPC DGWSANKGLR DVFRLQVNLA AANLAVQSGL RTVNQAVYVV FIGSCGPMHE
201: IFPCDERVMR VEDYWVYKPY LPRLKQKLLM PVGSCQIAPS FAQFGQEAWR PKHEDNLASK AVTALPRRLR VAYVTVLHSS EAYVCGAIAL AQSIRQSGSH
301: KDMILLHDHT ITNKSLIGLS AAGWNLRLID RIRSPFSQKD SYNEWNYSKL RVWQVTDYDK LVFIDADFII LKKLDHLFYY PQLSASGNDK VLFNSGIMVL
401: EPSACMFKDL MEKSFKIESY NGGDQGFLNE IFVWWHRLSK RVNTMKYFDE KNHRRHDLPE NVEGLHYLGL KPWVCYRDYD CNWDISERRV FASDSVHEKW
501: WKVYDKMSEQ LKGYCGLNKN MEKRIEKWRR IAKNNSLPDR HWEIEVRDPR KTNLLVQ

Arabidopsis Description

GUX4Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ37]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.