Factsheet for PGSC0003DMT400048884

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g098970.1.1	Tomato	golgi	95.86	96.38
PGSC0003DMT400048888	Potato	nucleus	53.33	58.73
VIT_14s0128g00420.t01	Wine grape	golgi	53.51	54.4
KRG96838	Soybean	golgi	49.73	49.91
KRH33949	Soybean	plastid	49.73	48.17
KRH68559	Soybean	cytosol	30.45	47.61
Bra027954.1-P	Field mustard	golgi	45.95	46.88
CDY41730	Canola	endoplasmic reticulum, golgi	47.03	46.86
CDX95254	Canola	golgi	46.67	46.5
Bra031653.1-P	Field mustard	cytosol	43.78	46.02
Bra030750.1-P	Field mustard	plastid	43.42	45.82
AT1G54940.1	Thale cress	golgi	45.95	45.78
CDY32144	Canola	endoplasmic reticulum, golgi	44.86	44.46
AT1G08990.1	Thale cress	golgi	44.68	43.82
CDY32143	Canola	golgi	44.5	43.49
CDY06343	Canola	golgi	42.7	43.17
CDY31118	Canola	golgi	44.14	43.13
CDY22652	Canola	golgi	43.78	42.86
PGSC0003DMT400020680	Potato	golgi	43.06	41.28
PGSC0003DMT400020678	Potato	golgi	40.18	39.54
PGSC0003DMT400063796	Potato	golgi	37.48	32.1
PGSC0003DMT400060425	Potato	plasma membrane	15.5	16.14
PGSC0003DMT400029873	Potato	plasma membrane	15.32	15.95
PGSC0003DMT400012126	Potato	plasma membrane	12.61	14.71
PGSC0003DMT400030982	Potato	plasma membrane	11.89	14.19

Protein Annotations

EntrezGene:102598240	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044
UniProt:M1BMZ8	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	EnsemblPlantsGene:PGSC0003DMG400018996	PGSC:PGSC0003DMG400018996	EnsemblPlants:PGSC0003DMT400048884
PANTHER:PTHR11183	PANTHER:PTHR11183:SF51	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000295767D	RefSeq:XP_006361898.1
SEG:seg	:	:	:	:	:

Description

Glycosyl transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400018996]

Coordinates

chr1:+:76588319..76591816

Molecular Weight (calculated)

65199.5 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.381

Length

555 amino acids

Sequence
(BLAST)

001: MGSKPSHTKL KLVTISIVSF FIAFIYLSIS HSPKRHETLI FHTLKDHKQP TQIFPRHVIK PKWYKYLENK TKNSKFKIGL VNVHETPIEV KDLHDKEVDL
101: VNVHFRRVNK SVIWKDLFPE WINENVPQKS SQCPEIPMPE LKDYVDLDVV LARVPCENAT NVFRLQVNLV VANLLVKNGL DSNDIYREIY VVFIGPCSPM
201: LEIFRCDDQI WHEGNVWIYK PDLRRLKQKI LMPVGSCQLA TPFAVQGREV WRKYGSSSTS NKSAHKPREA YVTVLHSSES YVCGAISLAQ SIILSKSTKD
301: LILLVDNSIS QETLHSLKLA GWKIKIIERI RNPHAKRGTY NEWNYSKLRI WQLTEYDKLI FVDADFLFFK NLDHFFVFPQ LSAAGNCRHV FNSGIMIIEP
401: SECTFKTLME KTLSVVSYNG GDQGFLNEVF SWWHRWPAKL NFLKNFQTDE SRKYEYPKDA YAMHYLGLKP WMCYKDYDCN WDVLEYRDFP NDLIHAKWWQ
501: VYDSMPEELQ KFCDLTPEMD TRIRLERQKA KISNFSDAHW KIQVKDPRRL SDSDI

Best Arabidopsis Sequence Match ( AT1G54940.1 )
(BLAST)

001: MGTKTHNSRG KIFMIYLILV SLSLLGLILP FKPLFRITSP SSTLRIDLPS PQVNKNPKWL RLIRNYLPEK RIQVGFLNID EKERESYEAR GPLVLKNIHV
101: PLDHIPKNVT WKSLYPEWIN EEASTCPEIP LPQPEGSDAN VDVIVARVPC DGWSANKGLR DVFRLQVNLA AANLAVQSGL RTVNQAVYVV FIGSCGPMHE
201: IFPCDERVMR VEDYWVYKPY LPRLKQKLLM PVGSCQIAPS FAQFGQEAWR PKHEDNLASK AVTALPRRLR VAYVTVLHSS EAYVCGAIAL AQSIRQSGSH
301: KDMILLHDHT ITNKSLIGLS AAGWNLRLID RIRSPFSQKD SYNEWNYSKL RVWQVTDYDK LVFIDADFII LKKLDHLFYY PQLSASGNDK VLFNSGIMVL
401: EPSACMFKDL MEKSFKIESY NGGDQGFLNE IFVWWHRLSK RVNTMKYFDE KNHRRHDLPE NVEGLHYLGL KPWVCYRDYD CNWDISERRV FASDSVHEKW
501: WKVYDKMSEQ LKGYCGLNKN MEKRIEKWRR IAKNNSLPDR HWEIEVRDPR KTNLLVQ

Arabidopsis Description

GUX4Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ37]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.