Factsheet for PGSC0003DMT400063796

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
golgi 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	nucleus, plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064790.2.1	Tomato	golgi	97.84	97.84
HORVU0Hr1G000670.2	Barley	cytosol	48.15	78.39
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	77.62	78.35
Os05t0426400-01	Rice	mitochondrion	42.44	76.82
KRH72868	Soybean	golgi	74.38	74.84
KRH15962	Soybean	golgi	68.06	74.62
CDY04633	Canola	golgi, mitochondrion, peroxisome	69.29	70.27
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	65.59	69.11
AT1G77130.1	Thale cress	golgi	65.9	69.09
CDX96589	Canola	golgi, peroxisome, plasma membrane	65.74	68.93
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	65.59	68.88
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	63.27	64.57
EES01856	Sorghum	golgi	62.96	64.45
EES19558	Sorghum	golgi	62.65	64.34
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	62.04	63.81
Bra008292.1-P	Field mustard	extracellular, plasma membrane	54.63	63.78
HORVU1Hr1G065560.2	Barley	golgi	61.73	63.69
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	61.88	63.65
CDY38364	Canola	extracellular, golgi	54.48	63.6
TraesCS3D01G404100.1	Wheat	golgi	62.19	63.56
TraesCS3A01G409200.2	Wheat	golgi	62.04	63.41
TraesCS3B01G442700.1	Wheat	golgi	62.04	63.41
HORVU3Hr1G091400.3	Barley	golgi	61.88	63.35
HORVU0Hr1G000650.2	Barley	golgi	61.57	63.23
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	61.57	63.23
Zm00001d012224_P001	Maize	golgi	62.35	63.03
Zm00001d038229_P001	Maize	plasma membrane	61.42	62.97
Zm00001d042627_P005	Maize	golgi	61.57	62.54
GSMUA_Achr3P16530_001	Banana	plastid	55.56	61.86
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	48.3	59.85
GSMUA_Achr6P18570_001	Banana	plastid	48.46	59.81
CDY13574	Canola	plastid	42.13	58.96
GSMUA_Achr8P29450_001	Banana	plasma membrane	56.33	58.87
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	51.08	57.07
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	50.77	56.82
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	48.3	55.59
GSMUA_Achr10P...	Banana	golgi	46.3	54.95
GSMUA_Achr8P32660_001	Banana	plastid	57.41	54.55
PGSC0003DMT400048888	Potato	nucleus	34.1	43.85
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	69.29	43.38
PGSC0003DMT400020678	Potato	golgi	37.5	43.09
Bra017919.1-P	Field mustard	cytosol	67.59	42.48
PGSC0003DMT400020680	Potato	golgi	37.81	42.31
PGSC0003DMT400048884	Potato	golgi	32.1	37.48
PGSC0003DMT400060425	Potato	plasma membrane	15.43	18.76
PGSC0003DMT400029873	Potato	plasma membrane	14.97	18.2
PGSC0003DMT400030982	Potato	plasma membrane	12.5	17.42
PGSC0003DMT400012126	Potato	plasma membrane	12.19	16.6

Protein Annotations

EntrezGene:102593826	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	UniProt:A0A0B4J3L0	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834
GO:GO:0009987	GO:GO:0015020	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492	InterPro:Glyco_trans_8
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	EnsemblPlantsGene:PGSC0003DMG400024800	PGSC:PGSC0003DMG400024800	EnsemblPlants:PGSC0003DMT400063796
PANTHER:PTHR11183	PANTHER:PTHR11183:SF56	SUPFAM:SSF53448	UniParc:UPI0000443251	RefSeq:XP_006356282.1	:

Description

Glycogenin [Source:PGSC_GENE;Acc:PGSC0003DMG400024800]

Coordinates

chr4:-:58450858..58455854

Molecular Weight (calculated)

75010.3 Da

IEP (calculated)

6.702

GRAVY (calculated)

-0.408

Length

648 amino acids

Sequence
(BLAST)

001: MRGSLAGGPP SPIEPRQRLS VFTEETSKRR FLRSKVFRDG ERALHSPTKN RNFTCKFPTV KLILGVIALV AIWSLWHSPA IYNTEYISSS GSRAALMHRE
101: LSGHSSADQR YTSLLDIDWD QISQVIEKLA DRHEYQGVGI LNFNDSEIDQ LKELLPDAEH VILNLDHVPN NITWETIYPE WIDEEEEFEV PTCPSLPKIQ
201: FPGKPRIDLI VVKLPCKKSK DWYRDVARFH LQLAAARLAA SNKGYHPIHV LLVTEHFPTP NLFTCKELVV REGNAWLYEP NLNTLREKLH LPVGSCELAV
301: PLKAKANWHS GNVRREAYAT ILHSANFYVC GAIAAAQSIR LAGSTRDLVI LVDETISDYH RGGLEAAGWK IHTIKRIRNP KAEQDAYNEW NYSKFRLWQL
401: TDYDKIIFID ADLLILRNID FLFEMPEITA IGNNATLFNS GVMVVEPSNC TFQLLMDHIN EIESYNGGDQ GYLNEIFTWW HRIPKHMNFL KHYWEGDEEE
501: KKQMKTRLFG ADPPVLYVLH YLGLKPWLCF RDYDCNWNVG KLQEFASDVA HRTWWKVHDA MPDNLHKYCL LRSKQKAALE WDRREAEKAN FSDGHWKIKI
601: KDPRLETCYE EFCFWESMLW HWGETNWTDN ATSSPTPPMV NTASLSSL

Best Arabidopsis Sequence Match ( AT1G77130.1 )
(BLAST)

001: MIPSSSPMES RHRLSFSNEK TSRRRFQRIE KGVKFNTLKL VLICIMLGAL FTIYRFRYPP LQIPEIPTSF GLTTDPRYVA TAEINWNHMS NLVEKHVFGR
101: SEYQGIGLIN LNDNEIDRFK EVTKSDCDHV ALHLDYAAKN ITWESLYPEW IDEVEEFEVP TCPSLPLIQI PGKPRIDLVI AKLPCDKSGK WSRDVARLHL
201: QLAAARVAAS SKGLHNVHVI LVSDCFPIPN LFTGQELVAR QGNIWLYKPN LHQLRQKLQL PVGSCELSVP LQAKDNFYSA GAKKEAYATI LHSAQFYVCG
301: AIAAAQSIRM SGSTRDLVIL VDETISEYHK SGLVAAGWKI QMFQRIRNPN AVPNAYNEWN YSKFRLWQLT EYSKIIFIDA DMLILRNIDF LFEFPEISAT
401: GNNATLFNSG LMVVEPSNST FQLLMDNINE VVSYNGGDQG YLNEIFTWWH RIPKHMNFLK HFWEGDEPEI KKMKTSLFGA DPPILYVLHY LGYNKPWLCF
501: RDYDCNWNVD IFQEFASDEA HKTWWRVHDA MPENLHKFCL LRSKQKAQLE WDRRQAEKGN YKDGHWKIKI KDKRLKTCFE DFCFWESMLW HWGETNSTNN
601: SSTTTTSSPP HKTALPSL

Arabidopsis Description

GUX3Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WC33]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.