Factsheet for TraesCS3A01G409200.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G404100.1	Wheat	golgi	99.84	99.84
TraesCS3B01G442700.1	Wheat	golgi	99.53	99.53
HORVU3Hr1G091400.3	Barley	golgi	98.42	98.58
EES01856	Sorghum	golgi	89.12	89.26
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	89.27	89.13
Zm00001d012224_P001	Maize	golgi	87.07	86.12
Zm00001d042627_P005	Maize	golgi	86.12	85.58
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	80.76	81.14
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	66.25	65.42
VIT_04s0044g00990.t01	Wine grape	golgi	64.98	64.78
Solyc11g005760.1.1	Tomato	cytosol	57.41	63.97
KRH15962	Soybean	golgi	59.31	63.62
KRH53878	Soybean	cytosol, golgi, mitochondrion	63.72	63.22
KRH64070	Soybean	plastid	63.56	63.07
GSMUA_Achr3P16530_001	Banana	plastid	57.89	63.06
Solyc04g064790.2.1	Tomato	golgi	63.41	62.04
PGSC0003DMT400063796	Potato	golgi	63.41	62.04
KRH59555	Soybean	cytosol	62.62	62.03
KRH72868	Soybean	golgi	62.78	61.8
GSMUA_Achr8P29450_001	Banana	plasma membrane	58.52	59.84
CDY04633	Canola	golgi, mitochondrion, peroxisome	59.78	59.31
AT1G77130.1	Thale cress	golgi	57.73	59.22
CDX96589	Canola	golgi, peroxisome, plasma membrane	57.26	58.74
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	57.1	58.67
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	56.78	58.54
Bra037570.1-P	Field mustard	plastid	60.57	58.18
CDY18535	Canola	plastid	60.25	57.88
CDY53768	Canola	plastid	59.78	57.42
KRH57436	Soybean	cytosol	53.63	57.24
AT3G18660.2	Thale cress	plastid	58.99	56.75
CDX92257	Canola	plastid	55.99	56.44
Bra022342.1-P	Field mustard	plastid	55.84	56.19
Bra008292.1-P	Field mustard	extracellular, plasma membrane	49.05	56.04
CDY38364	Canola	extracellular, golgi	48.74	55.68
CDY13574	Canola	plastid	37.54	51.4
TraesCS5A01G067100.1	Wheat	golgi	48.27	47.52
TraesCS3A01G381300.1	Wheat	golgi	45.11	47.51
TraesCS4A01G004100.1	Wheat	golgi	38.96	41.72
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	60.09	36.81
Bra017919.1-P	Field mustard	cytosol	59.78	36.76
TraesCS6A01G223900.1	Wheat	plasma membrane	15.93	18.67
TraesCS2A01G381700.1	Wheat	plasma membrane	15.14	17.74
TraesCS2A01G412200.1	Wheat	plasma membrane	11.36	15.29
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	11.2	14.46

Protein Annotations

EnsemblPlants:TraesCS3A01G409200.2	EnsemblPlantsGene:TraesCS3A01G409200	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF91
PFAM:PF01501	SEG:seg	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix	MapMan:21.2.2.1.2.1

Description

No Description!

Coordinates

chr3A:-:653851974..653856503

Molecular Weight (calculated)

73228.6 Da

IEP (calculated)

8.748

GRAVY (calculated)

-0.397

Length

634 amino acids

Sequence
(BLAST)

001: MGSLEARYRP AGAADDTAKR RTQKSKSFKE VEKFDVFVLE KSSGCKFRSL QLLLFAIMSA AFLTLLYTPS VYEHQLQSNS RFVNVGWIWD KTIPDPRYVS
101: TMPVQWDDVY KTIESLNGGE QKLKVGLLNF NSTEFGSWTQ LLPESEFSII RLEHANESIT WQTLYPEWID EEEETEIPSC PSLPEPNFPR GTHFDVIAVK
201: LPCTRVGGWS RDVARLHLQL SAAKLAVTAA RGNRGVHVMF VTECFPLPNL FSCKNLKKHE GNAWLYKPDS KALKEKLRLP IGSCELAVPL KAKSRLYSVD
301: RRREAYATIL HSASEYVCGA IAAAQSIRQA GSTRDFVILV DDTISDHHRK GLESAGWKVR IIERIRNPKA ERDAYNEWNY SKFRLWQLTD YDKIIFIDAD
401: LLILRNIDFL FTMPEISATG NNATLFNSGV MVIEPSNCTF QLLMNHINEI TSYNGGDQGY LNEIFTWWHR IPKHMNFLKH FWEGDEEEVK AKKTQLFGAN
501: PPILYVLHYL GRKPWLCFRD YDCNWNVPIL REFASDIAHT RWWKVHDKMP KKLQSYCLLR SRLKAGLEWE RRQAEKANFT DGHWKRNITD KRLKICFEKF
601: CFWESMLWHW GEAPNNATKK ASTPALPAAT LSSS

Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Arabidopsis Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.