CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol, peroxisome, plastid

Predictor Summary:

plastid 3
vacuole 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, vacuole
Any Predictor:	peroxisome, plastid, vacuole
BaCelLo:	plastid
MultiLoc:	vacuole
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04633	Canola	golgi, mitochondrion, peroxisome	60.68	98.28
Bra017919.1-P	Field mustard	cytosol	97.29	97.67
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	54.4	91.25
CDX96589	Canola	golgi, peroxisome, plasma membrane	54.2	90.78
Os05t0426400-01	Rice	mitochondrion	25.7	74.3
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	45.7	73.68
KRH72868	Soybean	golgi	45.7	73.45
HORVU0Hr1G000670.2	Barley	cytosol	28.02	72.86
KRH15962	Soybean	golgi	41.16	72.08
CDY38364	Canola	extracellular, golgi	37.39	69.73
PGSC0003DMT400063796	Potato	golgi	43.38	69.29
Solyc04g064790.2.1	Tomato	golgi	43.28	69.14
CDY13574	Canola	plastid	29.37	65.66
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	38.16	62.2
EES01856	Sorghum	golgi	37.0	60.51
GSMUA_Achr3P16530_001	Banana	plastid	33.91	60.31
TraesCS3A01G409200.2	Wheat	golgi	36.81	60.09
TraesCS3D01G404100.1	Wheat	golgi	36.81	60.09
EES19558	Sorghum	golgi	36.62	60.06
HORVU1Hr1G065560.2	Barley	golgi	36.33	59.87
TraesCS3B01G442700.1	Wheat	golgi	36.62	59.78
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	36.43	59.75
HORVU3Hr1G091400.3	Barley	golgi	36.52	59.72
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	36.33	59.68
Zm00001d038229_P001	Maize	plasma membrane	36.43	59.65
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	36.23	59.52
HORVU0Hr1G000650.2	Barley	golgi	36.23	59.43
Zm00001d042627_P005	Maize	golgi	36.52	59.25
GSMUA_Achr8P29450_001	Banana	plasma membrane	35.36	59.03
CDY18535	Canola	plastid	37.58	58.94
Zm00001d012224_P001	Maize	golgi	36.23	58.5
CDY53768	Canola	plastid	37.1	58.18
GSMUA_Achr6P18570_001	Banana	plastid	29.37	57.9
CDX92257	Canola	plastid	34.98	57.55
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	28.12	55.64
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	29.66	54.53
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	30.24	53.97
GSMUA_Achr8P32660_001	Banana	plastid	34.88	52.93
GSMUA_Achr10P...	Banana	golgi	27.54	52.2
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	29.18	52.16
CDX99330	Canola	cytosol	6.57	47.22
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	23.67	41.39
CDX68968	Canola	golgi	23.96	40.92
CDX75345	Canola	golgi, plastid	23.77	40.8
CDY32144	Canola	endoplasmic reticulum, golgi	21.35	39.46
CDX95254	Canola	golgi	21.06	39.14
CDY41730	Canola	endoplasmic reticulum, golgi	20.97	38.96
CDY32143	Canola	golgi	21.16	38.56
CDY31118	Canola	golgi	21.16	38.56
CDY22652	Canola	golgi	20.97	38.27
CDY06343	Canola	golgi	19.71	37.16
CDY28291	Canola	nucleus	6.76	30.3
CDY28292	Canola	golgi	18.16	25.44
CDY58112	Canola	plasma membrane	10.63	20.75
CDY02625	Canola	plasma membrane	10.34	20.07
CDX88935	Canola	plasma membrane	10.24	19.85
CDX70822	Canola	plasma membrane	10.14	19.74
CDY29996	Canola	extracellular, plasma membrane	9.95	18.86
CDY21129	Canola	extracellular, golgi, plasma membrane	9.76	18.5
CDY40445	Canola	plasma membrane	6.96	14.57
CDX84174	Canola	plasma membrane	6.96	14.57
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	5.99	14.52
CDY32093	Canola	cytosol	5.99	14.42
CDY40528	Canola	plasma membrane	5.51	10.27

Protein Annotations

KEGG:00051+2.4.1.-	KEGG:00512+2.4.1.-	KEGG:00513+2.4.1.-	KEGG:00514+2.4.1.-	KEGG:00522+2.4.1.-	KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-	KEGG:00550+2.4.1.-	KEGG:00561+2.4.1.-	KEGG:00563+2.4.1.-	KEGG:00600+2.4.1.-	KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-	KEGG:00604+2.4.1.-	KEGG:00906+2.4.1.-	KEGG:00908+2.4.1.-	KEGG:00941+2.4.1.-	KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-	KEGG:00945+2.4.1.-	KEGG:00965+2.4.1.-	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	GO:A0A078IMH9
UniProt:A0A078IMH9	EnsemblPlants:CDY50243	ProteinID:CDY50243	ProteinID:CDY50243.1	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00096223001	InterPro:Glyco_trans_8	InterPro:IPR001810	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PFAM:PF00646	PFAM:PF01501	PFAM:PF08268	PANTHER:PTHR11183	PANTHER:PTHR11183:SF56
SMART:SM00256	SUPFAM:SSF53448	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0004EE889E	:

Description

BnaA06g15200DBnaA06g15200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMH9]

Coordinates

chrLK032892:-:62230..66447

Molecular Weight (calculated)

118751.0 Da

IEP (calculated)

7.728

GRAVY (calculated)

-0.305

Length

1035 amino acids

Sequence
(BLAST)

0001: MRLPSPSPVE PRHRLSSQTD ESSKRRSLRN RDAKDLEKGG LHGSFHYRNW TAKFSTLKVV LLLIVLGTVY TLYRSPAVHI ADHPSNNNSS FVSRWMIESS
0101: AIDPRYVSTA EINWDHMSDV VEKLTGKSGY QGVGFINLND DEIAQWKDLI PDCDHVALHL GHMASNITWE SLYPEWIDEE EQFEVPTCPS LPWIQVPGKP
0201: RLDLVVVKLP CNKAGKWSRD VVRLHLQLAA ARVAASSKGL HDVHVLFITD CFPIPNLFIG KELVVRQGNL WLFKPNLHQL RQKVQLPIGS CALTVPLKAK
0301: DTFYSASAKR EAYATILHSA NFYVCGAITA AQSIRMAGST RDLVILVDDS ITEHHRSGLA AAGWKIYSIQ RIRNPKAEAE AYNEWNYSKF RLWQLTEYDK
0401: IIFIDADMLI LRNIDFLFEM PEISATGNNA TLFNSGVMVV EPSNSTFQLL MDHINEIVSY NGGDQGYLNE VYTWWHRIPK HMNFLKHFWE GDEPEIKQMK
0501: TRLFGTDPPI LYVLHYLGNK PWLCFRDYDC NWNVDILQEF ASDVAHKTWW RVHDAMPENL QKFCLLRSKQ KAQLEWDRMQ AEKGNYTDGH WKIKIKDKRL
0601: ETCYEDFCYW ESMLWHWGDK NWTDNSTNSL SPPPALKTPL SSLAMESEKP HPQIKVGRTR QSEATYLPVD LVSDILLRLP AKSIVKFRCV SKVWSSITTL
0701: PSFISSFAAR SSPRLLILSE KNGKLFGFSI PQNQNSDNKP QLVESYALPY PGNCSVFWNV SVHGMICSSV SLKLEVWNPT TRRTVILPHP KRGWSNMSCF
0801: LGFDPIDGTS KVLSMPRYPC SKEDNRPRVL TLTGDHKESW RVIQGITEHV PYCPGQHIIN GVIYYVASLK SHSDYILVSF HVRSEKMSMI EVPWNYLSVP
0901: KIFPVLYEGK LACVSSKDND VTKVDDIEIW ILEDAEKHEW SYKKIHLPFS RYDPISHACL DMKGVNDAGE LIYVPLDLVN PVRLLYYDLN TNVYRRVVVE
1001: GLADDQFRRR NGIGDNNILR TLAVYPNHIE TLMSL

Best Arabidopsis Sequence Match ( AT1G77130.1 )
(BLAST)

001: MIPSSSPMES RHRLSFSNEK TSRRRFQRIE KGVKFNTLKL VLICIMLGAL FTIYRFRYPP LQIPEIPTSF GLTTDPRYVA TAEINWNHMS NLVEKHVFGR
101: SEYQGIGLIN LNDNEIDRFK EVTKSDCDHV ALHLDYAAKN ITWESLYPEW IDEVEEFEVP TCPSLPLIQI PGKPRIDLVI AKLPCDKSGK WSRDVARLHL
201: QLAAARVAAS SKGLHNVHVI LVSDCFPIPN LFTGQELVAR QGNIWLYKPN LHQLRQKLQL PVGSCELSVP LQAKDNFYSA GAKKEAYATI LHSAQFYVCG
301: AIAAAQSIRM SGSTRDLVIL VDETISEYHK SGLVAAGWKI QMFQRIRNPN AVPNAYNEWN YSKFRLWQLT EYSKIIFIDA DMLILRNIDF LFEFPEISAT
401: GNNATLFNSG LMVVEPSNST FQLLMDNINE VVSYNGGDQG YLNEIFTWWH RIPKHMNFLK HFWEGDEPEI KKMKTSLFGA DPPILYVLHY LGYNKPWLCF
501: RDYDCNWNVD IFQEFASDEA HKTWWRVHDA MPENLHKFCL LRSKQKAQLE WDRRQAEKGN YKDGHWKIKI KDKRLKTCFE DFCFWESMLW HWGETNSTNN
601: SSTTTTSSPP HKTALPSL

Arabidopsis Description

GUX3Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WC33]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.