CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031653.1-P	Field mustard	cytosol	89.25	92.8
CDY22652	Canola	golgi	94.72	91.71
CDY31118	Canola	golgi	81.24	78.52
CDY32143	Canola	golgi	80.51	77.82
AT1G08990.1	Thale cress	golgi	78.32	75.97
CDY32144	Canola	endoplasmic reticulum, golgi	77.41	75.89
CDY41730	Canola	endoplasmic reticulum, golgi	66.48	65.53
CDX95254	Canola	golgi	65.76	64.81
VIT_14s0128g00420.t01	Wine grape	golgi	48.45	48.72
PGSC0003DMT400048888	Potato	nucleus	43.9	47.82
KRG96838	Soybean	golgi	46.63	46.29
Solyc01g098960.1.1	Tomato	golgi	44.63	44.14
Solyc01g098970.1.1	Tomato	golgi	43.35	43.12
KRH68559	Soybean	cytosol	27.87	43.1
KRH33949	Soybean	plastid	44.81	42.93
PGSC0003DMT400048884	Potato	golgi	43.17	42.7
CDX75345	Canola	golgi, plastid	43.9	39.97
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	42.81	39.7
CDX68968	Canola	golgi	43.72	39.6
CDY38364	Canola	extracellular, golgi	33.33	32.97
CDY13574	Canola	plastid	26.96	31.97
CDY04633	Canola	golgi, mitochondrion, peroxisome	37.16	31.92
CDY18535	Canola	plastid	37.7	31.36
CDY53768	Canola	plastid	37.7	31.36
CDX96589	Canola	golgi, peroxisome, plasma membrane	34.61	30.74
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	34.43	30.63
CDX92257	Canola	plastid	34.43	30.05
CDY28291	Canola	nucleus	11.29	26.84
CDY28292	Canola	golgi	33.52	24.9
CDX99330	Canola	cytosol	6.01	22.92
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	37.16	19.71
CDY58112	Canola	plasma membrane	16.94	17.55
CDY02625	Canola	plasma membrane	16.58	17.07
CDX88935	Canola	plasma membrane	16.58	17.04
CDX70822	Canola	plasma membrane	16.21	16.73
CDY29996	Canola	extracellular, plasma membrane	16.03	16.12
CDY21129	Canola	extracellular, golgi, plasma membrane	15.66	15.75
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	11.29	14.52
CDY32093	Canola	cytosol	10.75	13.72
CDX84174	Canola	plasma membrane	12.02	13.36
CDY40445	Canola	plasma membrane	11.66	12.96
CDY40528	Canola	plasma membrane	10.38	10.27

Protein Annotations

EnsemblPlants:CDY06343	EnsemblPlantsGene:GSBRNA2T00122275001	Gene3D:3.90.550.10	GO:A0A078F3P9	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183
PANTHER:PTHR11183:SF51	PFAM:PF01501	ProteinID:CDY06343	ProteinID:CDY06343.1	SEG:seg	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI0004EEC217	MapMan:21.2.2.1.2.1	:	:	:

Description

BnaA09g48600D

Coordinates

chrLK031968:+:885216..888001

Molecular Weight (calculated)

63766.4 Da

IEP (calculated)

10.191

GRAVY (calculated)

-0.434

Length

549 amino acids

Sequence
(BLAST)

001: MGLKNKKKSR RILMFYLTLM SFSFLGLVVT FKPLFLLNPM INSPSIVEIR YSLPTEVNRN PRWFRLIKNH LQEKKIRVGL LNIEENERES YEATGTVYFR
101: CGSTRIIAGP GHTPTCPEVP LPRVEGSDAD VDVVVVKVPC DGVREDKGLR DVFRLQVNLA AAKLVVESGR RNVDRTVYVV FIGSCGPMHE IFRCDERVRR
201: VGEYWLYRPN LEKLKQKLVM PVGSCQIAPL PAQLDQEAWR RQKNETLTSR TTLSSSSGAQ RVGYVTLLHS SEVYVCGAIA LAQSIRQSGS THDMILLHDK
301: SITNTSRVGL SRAGWKLRQV ERIRSPFSKK DSYNEWNYSK LRVWQVTDYD KLVFIDADFI IAKNVDYLFS FPQLSAAGND KFLFNSGVMV LEPSACLFKE
401: LMLNSFKIKS YNGGDQGFLN EYFVWWHRLS KHVNTMKYFG AESKNSQKRN LPDNLEGIHY LGLKPWLCYR DYDCNWDLKS RRVYASESVH EKWWKVYDKM
501: PKKLRGYCGL TRKMEKNIEK WRKMAKVKGL PERHWRIQVR DPRKKNLLD

Best Arabidopsis Sequence Match ( AT1G08990.1 )
(BLAST)

001: MGAKSKSSST RFFMFYLILI SLSFLGLLLN FKPLFLLNPM IASPSIVEIR YSLPEPVKRT PIWLRLIRNY LPDEKKIRVG LLNIAENERE SYEASGTSIL
101: ENVHVSLDPL PNNLTWTSLF PVWIDEDHTW HIPSCPEVPL PKMEGSEADV DVVVVKVPCD GFSEKRGLRD VFRLQVNLAA ANLVVESGRR NVDRTVYVVF
201: IGSCGPMHEI FRCDERVKRV GDYWVYRPDL TRLKQKLLMP PGSCQIAPLG QGEAWIQDKN RNLTSEKTTL SSFTAQRVAY VTLLHSSEVY VCGAIALAQS
301: IRQSGSTKDM ILLHDDSITN ISLIGLSLAG WKLRRVERIR SPFSKKRSYN EWNYSKLRVW QVTDYDKLVF IDADFIIVKN IDYLFSYPQL SAAGNNKVLF
401: NSGVMVLEPS ACLFEDLMLK SFKIGSYNGG DQGFLNEYFV WWHRLSKRLN TMKYFGDESR HDKARNLPEN LEGIHYLGLK PWRCYRDYDC NWDLKTRRVY
501: ASESVHARWW KVYDKMPKKL KGYCGLNLKM EKNVEKWRKM AKLNGFPENH WKIRIKDPRK KNRLSQ

Arabidopsis Description

GUX5Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:F4HZC3]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.