Factsheet for AT1G08990.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031653.1-P	Field mustard	cytosol	75.97	81.44
Bra030750.1-P	Field mustard	plastid	75.27	80.99
CDY32143	Canola	golgi	80.74	80.46
CDY31118	Canola	golgi	80.57	80.28
CDY22652	Canola	golgi	79.86	79.72
CDY32144	Canola	endoplasmic reticulum, golgi	77.56	78.39
CDY06343	Canola	golgi	75.97	78.32
AT1G54940.1	Thale cress	golgi	68.73	69.84
VIT_14s0128g00420.t01	Wine grape	golgi	49.65	51.47
PGSC0003DMT400048888	Potato	nucleus	44.52	50.0
KRG96838	Soybean	golgi	47.88	49.01
Solyc01g098960.1.1	Tomato	golgi	45.94	46.85
KRH33949	Soybean	plastid	46.47	45.9
Solyc01g098970.1.1	Tomato	golgi	44.35	45.47
KRH68559	Soybean	cytosol	28.09	44.79
PGSC0003DMT400048884	Potato	golgi	43.82	44.68
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	42.58	38.5
AT1G77130.1	Thale cress	golgi	37.1	33.98
AT3G18660.2	Thale cress	plastid	39.05	33.54
AT5G18480.1	Thale cress	golgi	17.84	18.81
AT4G16600.1	Thale cress	plasma membrane	12.72	14.57
AT2G35710.1	Thale cress	plasma membrane	12.01	13.68

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EntrezGene:837420	ProteinID:AAB70408.1	ProteinID:AEE28380.1	ArrayExpress:AT1G08990
EnsemblPlantsGene:AT1G08990	RefSeq:AT1G08990	TAIR:AT1G08990	RefSeq:AT1G08990-TAIR-G	EnsemblPlants:AT1G08990.1	TAIR:AT1G08990.1
EMBL:BX815902	UniProt:F4HZC3	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0016757
GO:GO:0046872	GO:GO:0071555	InterPro:Glyco_trans_8	InterPro:IPR029044	EMBL:KJ139018	RefSeq:NP_172373.3
InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	Symbol:PGSIP5	PO:PO:0009005	PANTHER:PTHR11183	PANTHER:PTHR11183:SF51
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000015097A	UniProt:W8QPB2	SEG:seg	:

Description

GUX5Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:F4HZC3]

Coordinates

chr1:+:2888427..2890965

Molecular Weight (calculated)

65636.5 Da

IEP (calculated)

9.794

GRAVY (calculated)

-0.329

Length

566 amino acids

Sequence
(BLAST)

001: MGAKSKSSST RFFMFYLILI SLSFLGLLLN FKPLFLLNPM IASPSIVEIR YSLPEPVKRT PIWLRLIRNY LPDEKKIRVG LLNIAENERE SYEASGTSIL
101: ENVHVSLDPL PNNLTWTSLF PVWIDEDHTW HIPSCPEVPL PKMEGSEADV DVVVVKVPCD GFSEKRGLRD VFRLQVNLAA ANLVVESGRR NVDRTVYVVF
201: IGSCGPMHEI FRCDERVKRV GDYWVYRPDL TRLKQKLLMP PGSCQIAPLG QGEAWIQDKN RNLTSEKTTL SSFTAQRVAY VTLLHSSEVY VCGAIALAQS
301: IRQSGSTKDM ILLHDDSITN ISLIGLSLAG WKLRRVERIR SPFSKKRSYN EWNYSKLRVW QVTDYDKLVF IDADFIIVKN IDYLFSYPQL SAAGNNKVLF
401: NSGVMVLEPS ACLFEDLMLK SFKIGSYNGG DQGFLNEYFV WWHRLSKRLN TMKYFGDESR HDKARNLPEN LEGIHYLGLK PWRCYRDYDC NWDLKTRRVY
501: ASESVHARWW KVYDKMPKKL KGYCGLNLKM EKNVEKWRKM AKLNGFPENH WKIRIKDPRK KNRLSQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.