Factsheet for AT3G18660.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53768	Canola	plastid	92.41	92.27
Bra037570.1-P	Field mustard	plastid	92.26	92.12
CDY18535	Canola	plastid	92.26	92.12
Bra022342.1-P	Field mustard	plastid	86.34	90.32
CDX92257	Canola	plastid	85.74	89.83
Os05t0426400-01	Rice	mitochondrion	39.0	71.79
HORVU0Hr1G000670.2	Barley	cytosol	43.1	71.36
Solyc11g005760.1.1	Tomato	cytosol	60.24	69.77
KRH53878	Soybean	cytosol, golgi, mitochondrion	66.31	68.39
VIT_04s0044g00990.t01	Wine grape	golgi	65.71	68.08
KRH64070	Soybean	plastid	65.71	67.76
KRH59555	Soybean	cytosol	63.73	65.62
AT1G77130.1	Thale cress	golgi	58.42	62.3
Os01t0880200-01	Rice	cytosol, golgi, peroxisome	57.51	59.69
EES01856	Sorghum	golgi	56.9	59.24
HORVU3Hr1G091400.3	Barley	golgi	56.9	59.24
HORVU1Hr1G065560.2	Barley	golgi	56.45	59.24
TraesCS3D01G404100.1	Wheat	golgi	56.9	59.15
TraesCS3A01G409200.2	Wheat	golgi	56.75	58.99
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	56.3	58.89
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	56.3	58.89
Zm00001d038229_P001	Maize	plasma membrane	56.45	58.86
TraesCS3B01G442700.1	Wheat	golgi	56.6	58.83
Zm00001d012224_P001	Maize	golgi	57.21	58.81
EES19558	Sorghum	golgi	56.3	58.8
HORVU0Hr1G000650.2	Barley	golgi	56.3	58.8
Zm00001d042627_P005	Maize	golgi	56.9	58.78
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	56.15	58.64
KRH57436	Soybean	cytosol	52.81	58.59
GSMUA_Achr3P16530_001	Banana	plastid	50.53	57.22
GSMUA_Achr7P23420_001	Banana	cytosol, plastid	44.01	55.45
GSMUA_Achr6P18570_001	Banana	plastid	43.85	55.05
GSMUA_Achr7P03050_001	Banana	endoplasmic reticulum	48.1	54.75
GSMUA_Achr8P29450_001	Banana	plasma membrane	50.99	54.19
GSMUA_Achr4P16410_001	Banana	endoplasmic reticulum, golgi	46.13	54.0
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	46.74	53.1
GSMUA_Achr8P32660_001	Banana	plastid	53.11	51.32
GSMUA_Achr10P...	Banana	golgi	42.19	50.92
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	39.0	41.05
AT1G54940.1	Thale cress	golgi	33.84	40.04
AT1G08990.1	Thale cress	golgi	33.54	39.05
AT5G18480.1	Thale cress	golgi	14.72	18.06
AT2G35710.1	Thale cress	plasma membrane	11.23	14.89
AT4G16600.1	Thale cress	plasma membrane	10.62	14.17

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EntrezGene:821397	ProteinID:AEE76127.1	ProteinID:AEE76128.1	ArrayExpress:AT3G18660
EnsemblPlantsGene:AT3G18660	RefSeq:AT3G18660	TAIR:AT3G18660	RefSeq:AT3G18660-TAIR-G	EnsemblPlants:AT3G18660.2	TAIR:AT3G18660.2
EMBL:AY056133	EMBL:AY142690	EMBL:AY749109	Unigene:At.6378	ProteinID:BAB01792.1	ncoils:Coil
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009834	GO:GO:0009987	GO:GO:0010417	GO:GO:0015020	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492	GO:GO:0046872
GO:GO:0071555	GO:GO:0080116	InterPro:GUX	InterPro:Glyco_trans_8	InterPro:IPR029044	EMBL:KJ138819
RefSeq:NP_001030722.1	RefSeq:NP_566615.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	Symbol:PGSIP1	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001185	PO:PO:0007064
PO:PO:0007098	PO:PO:0007103	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009062	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR11183	PANTHER:PTHR11183:SF45	UniProt:Q9LSB1	SUPFAM:SSF53448
UniParc:UPI00000A11ED	UniProt:W8Q6S4	SEG:seg	:	:	:

Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]

Coordinates

chr3:-:6419013..6422141

Molecular Weight (calculated)

76288.8 Da

IEP (calculated)

8.008

GRAVY (calculated)

-0.435

Length

659 amino acids

Sequence
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.