Factsheet for TraesCS1A01G266600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, golgi, peroxisome

Predictor Summary:

golgi 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, golgi, peroxisome
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G266700.2	Wheat	cytosol, golgi, peroxisome	98.57	98.73
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	97.94	98.1
HORVU0Hr1G000670.2	Barley	cytosol	61.17	96.98
HORVU1Hr1G065560.2	Barley	golgi	95.88	96.34
HORVU0Hr1G000650.2	Barley	golgi	95.25	95.25
EES19558	Sorghum	golgi	85.74	85.74
Os05t0426400-01	Rice	mitochondrion	48.34	85.2
Zm00001d038229_P001	Maize	plasma membrane	83.2	83.07
TraesCS3A01G409200.2	Wheat	golgi	81.14	80.76
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	65.29	64.17
Solyc11g005760.1.1	Tomato	cytosol	57.69	63.97
Solyc04g064790.2.1	Tomato	golgi	63.87	62.19
GSMUA_Achr3P16530_001	Banana	plastid	57.05	61.86
KRH15962	Soybean	golgi	57.69	61.59
PGSC0003DMT400063796	Potato	golgi	63.23	61.57
KRH53878	Soybean	cytosol, golgi, mitochondrion	62.28	61.5
VIT_04s0044g00990.t01	Wine grape	golgi	61.97	61.48
KRH64070	Soybean	plastid	62.12	61.35
KRH72868	Soybean	golgi	62.12	60.87
KRH59555	Soybean	cytosol	61.49	60.62
GSMUA_Achr8P29450_001	Banana	plasma membrane	58.64	59.68
CDY04633	Canola	golgi, mitochondrion, peroxisome	60.22	59.47
CDX96589	Canola	golgi, peroxisome, plasma membrane	57.37	58.58
AT1G77130.1	Thale cress	golgi	57.37	58.58
Bra016419.1-P	Field mustard	golgi, peroxisome, plasma membrane	57.05	58.54
CDY38807	Canola	endoplasmic reticulum, golgi, peroxisome	57.21	58.51
AT3G18660.2	Thale cress	plastid	58.64	56.15
KRH57436	Soybean	cytosol	52.77	56.06
CDY18535	Canola	plastid	58.48	55.91
Bra037570.1-P	Field mustard	plastid	58.16	55.61
CDY53768	Canola	plastid	58.16	55.61
Bra022342.1-P	Field mustard	plastid	55.15	55.24
Bra008292.1-P	Field mustard	extracellular, plasma membrane	48.34	54.95
CDX92257	Canola	plastid	54.68	54.85
CDY38364	Canola	extracellular, golgi	48.02	54.59
CDY13574	Canola	plastid	37.4	50.97
TraesCS5A01G067100.1	Wheat	golgi	49.29	48.29
TraesCS3A01G381300.1	Wheat	golgi	45.01	47.18
TraesCS4A01G004100.1	Wheat	golgi	39.94	42.57
CDY50243	Canola	cytosol, peroxisome, plastid, vacuole	59.75	36.43
Bra017919.1-P	Field mustard	cytosol	59.11	36.18
TraesCS6A01G223900.1	Wheat	plasma membrane	16.16	18.85
TraesCS2A01G381700.1	Wheat	plasma membrane	15.21	17.74
TraesCS2A01G412200.1	Wheat	plasma membrane	11.41	15.29
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	11.89	15.27

Protein Annotations

EnsemblPlants:TraesCS1A01G266600.2	EnsemblPlantsGene:TraesCS1A01G266600	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF91
PFAM:PF01501	SEG:seg	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix	MapMan:21.2.2.1.2.1

Description

No Description!

Coordinates

chr1A:-:462001105..462005023

Molecular Weight (calculated)

72999.8 Da

IEP (calculated)

8.505

GRAVY (calculated)

-0.444

Length

631 amino acids

Sequence
(BLAST)

001: MEQRHRPAAA ADDTTKRRTT KNKSFKDVEN YEVLVLEKNC GCKFKSLRYL LIAIVSATFL TLLTPTLYER QLQSSSRYVD VDWIWDKTSA DPRYVSSADV
101: QWADVYTAIE DLSAGNQELK IGLLNFNSTE YGSWSRILPE SHVSIVRLEH AKDSITWPKL YPEWIDEEEE SEIPSCPSFP EPNVRRGAWF DVVAVKLPCT
201: RVAGWSRDVA RLHLQLSAAK LAVTSSRGNR KVHVLFVTDC FPIPNLFPCK NLVKHEGNAW LYRPDLKAVR EKLRLPVGSC ELAIPLKAKA RLFSVDRRRE
301: AYATILHSAS EYVCGAITAA QSIRQAGSTR DLVILVDNTI SDHHRRGLEA AGWKVRIIER IRNPKAERDA YNEWNYSKFR LWQLTDYDKI IFIDADLLIL
401: RNVDFLFAMP EITATGNNAT LFNSGVMVIE PSNCTFQLLM EHINEITSYN GGDQGYLNEI FTWWHRIPKH MNFLKHFWEG DSEEAKAKKT QLFGADPPGL
501: YVLHYLGLKP WLCFRDYDCN WNNFMMREFA SDVAHSRWWK THDKMPRRLQ SYCLLRTRQK AGLEWDRRQA EKANLEDGHW RRNITDPRLK TCFEKFCFWE
601: SMLWHWGEAK NQSKSNPAPA TPATVSLSSS S

Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)

001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

Arabidopsis Description

GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.