Factsheet for TraesCS2A01G412200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G097240.1	Barley	cytosol, mitochondrion, plasma membrane	92.36	98.64
TraesCS2B01G430800.1	Wheat	plasma membrane	97.88	98.09
TraesCS2D01G409400.1	Wheat	plasma membrane	97.88	97.46
OQU82100	Sorghum	plasma membrane	81.74	89.95
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	83.44	88.31
Zm00001d002725_P001	Maize	plasma membrane	85.35	85.71
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	73.89	80.74
GSMUA_Achr11P...	Banana	cytosol	73.46	80.28
GSMUA_Achr5P20900_001	Banana	plasma membrane	71.55	78.19
Zm00001d026165_P003	Maize	plasma membrane	76.43	75.31
GSMUA_Achr5P15460_001	Banana	cytosol	67.09	73.32
GSMUA_Achr1P01490_001	Banana	cytosol	66.67	72.85
GSMUA_Achr5P13360_001	Banana	cytosol	66.03	72.16
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	58.17	71.73
CDY32093	Canola	cytosol	61.78	67.67
KRH77365	Soybean	cytosol, peroxisome	47.35	67.58
Solyc06g060710.2.1	Tomato	cytosol	55.2	67.53
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	61.15	67.45
KRH28078	Soybean	plasma membrane	66.67	66.53
KRH04125	Soybean	plasma membrane	67.09	66.39
PGSC0003DMT400012126	Potato	plasma membrane	67.09	66.39
Solyc08g078650.2.1	Tomato	plasma membrane	65.82	66.1
KRH57402	Soybean	extracellular, golgi, plasma membrane	66.88	66.04
PGSC0003DMT400030982	Potato	plasma membrane	64.76	65.59
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	64.76	62.12
Bra005312.1-P	Field mustard	plasma membrane	64.54	61.54
CDX84174	Canola	plasma membrane	64.54	61.54
AT2G35710.1	Thale cress	plasma membrane	63.48	60.16
CDY40445	Canola	plasma membrane	63.06	60.12
Bra017301.1-P	Field mustard	plasma membrane	63.06	60.12
Bra038490.1-P	Field mustard	plasma membrane	62.21	60.04
AT4G16600.1	Thale cress	plasma membrane	62.84	59.92
CDY40528	Canola	plasma membrane	53.29	45.23
TraesCS6A01G223900.1	Wheat	plasma membrane	19.75	17.19
TraesCS2A01G381700.1	Wheat	plasma membrane	18.26	15.9
TraesCS3A01G381300.1	Wheat	golgi	16.35	12.79
TraesCS4A01G004100.1	Wheat	golgi	14.65	11.66
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	15.29	11.41
TraesCS3A01G409200.2	Wheat	golgi	15.29	11.36
TraesCS5A01G067100.1	Wheat	golgi	13.8	10.09

Protein Annotations

Gene3D:3.90.550.10	MapMan:35.1	InterPro:Alpha_mannosyltransferase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF11051
PANTHER:PTHR11183	PANTHER:PTHR11183:SF93	SUPFAM:SSF53448	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G412200
EnsemblPlants:TraesCS2A01G412200.1	TIGR:cd02537	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:669841176..669847099

Molecular Weight (calculated)

53411.4 Da

IEP (calculated)

8.734

GRAVY (calculated)

0.248

Length

471 amino acids

Sequence
(BLAST)

001: MGRLAGLRWL LVLAWAAAGA LAAEEDGKAA VVAPGPRRHA YAAMMYMGTP RDYEFYVATR VMMRSLRGFG ADADRVVIAS LDVPPSWVQA LKDDGVKVVS
101: VDNLKNPYEK QDNFNSRFKL TLNKLYAWSL VSYDRVVMLD SDNMFLQNTD ELFQCGHFCA VFINPCIFHT GLFVLKPSMD VFKNMLHELA VGRENPDGAD
201: QGFLASYFPD LLDQPMFHPP VNGTKLDGNY RLPLGYQMDA SYYYLKLRWS IPCGPNSVVT FPSAPWMKPW YWWSWPVLPL GLSWHEQRRE NLGYSSEIPM
301: ALFQALLYIG VIAVNRLARP SLSKLCYNRR MEKSTMFLLT TLRVVAAWSI LAAYTIPFFL VPRTVHPLLG WPLYLLGSFS LSLIVINFFL LHPLAVLTTW
401: FGIIGTLFVM ACPWYTNGVV RALAVFAYAF FCAPVVWASL VKIMSSLQVL IERDAFRLGE PNQTAEFTKL Y

Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)

001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY

Arabidopsis Description

PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.