Factsheet for Solyc08g078650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012126	Potato	plasma membrane	96.8	95.38
Solyc06g060710.2.1	Tomato	cytosol	64.39	78.44
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	60.13	73.82
KRH77365	Soybean	cytosol, peroxisome	50.75	72.12
GSMUA_Achr11P...	Banana	cytosol	66.1	71.93
OQU82100	Sorghum	plasma membrane	65.25	71.5
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	65.46	71.23
GSMUA_Achr5P20900_001	Banana	plasma membrane	65.03	70.77
CDY32093	Canola	cytosol	64.82	70.7
GSMUA_Achr5P15460_001	Banana	cytosol	64.39	70.07
KRH57402	Soybean	extracellular, golgi, plasma membrane	70.79	69.6
KRH28078	Soybean	plasma membrane	69.72	69.28
HORVU2Hr1G097240.1	Barley	cytosol, mitochondrion, plasma membrane	64.61	68.71
KRH04125	Soybean	plasma membrane	69.72	68.7
GSMUA_Achr5P13360_001	Banana	cytosol	63.11	68.68
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	64.82	68.31
GSMUA_Achr1P01490_001	Banana	cytosol	62.69	68.21
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	61.19	67.21
Zm00001d002725_P001	Maize	plasma membrane	65.88	65.88
TraesCS2A01G412200.1	Wheat	plasma membrane	66.1	65.82
TraesCS2B01G430800.1	Wheat	plasma membrane	65.88	65.74
TraesCS2D01G409400.1	Wheat	plasma membrane	65.88	65.33
Bra017301.1-P	Field mustard	plasma membrane	68.23	64.78
Bra005312.1-P	Field mustard	plasma membrane	68.02	64.57
CDX84174	Canola	plasma membrane	67.8	64.37
CDY40445	Canola	plasma membrane	67.59	64.17
AT2G35710.1	Thale cress	plasma membrane	67.8	63.98
HORVU1Hr1G054100.7	Barley	mitochondrion	60.98	63.7
AT4G16600.1	Thale cress	plasma membrane	65.67	62.35
Bra038490.1-P	Field mustard	plasma membrane	63.33	60.86
OQU92160	Sorghum	golgi, mitochondrion	62.05	59.88
TraesCS1D01G214700.1	Wheat	golgi	62.26	59.84
Zm00001d047104_P001	Maize	golgi, mitochondrion	61.62	59.22
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	61.62	58.86
Zm00001d026165_P003	Maize	plasma membrane	59.06	57.95
Os10t0555100-01	Rice	golgi, plasma membrane	60.77	57.93
Zm00001d029920_P001	Maize	mitochondrion	61.41	56.69
TraesCS1B01G225300.1	Wheat	golgi	60.98	55.21
CDY40528	Canola	plasma membrane	53.09	44.86
Solyc04g009920.2.1	Tomato	golgi	20.47	18.01
Solyc05g055040.2.1	Tomato	plasma membrane	20.04	17.64
Solyc04g078980.2.1	Tomato	golgi	15.56	12.94
Solyc01g098970.1.1	Tomato	golgi	15.14	12.86
Solyc11g005760.1.1	Tomato	cytosol	15.56	12.83
Solyc04g064790.2.1	Tomato	golgi	16.63	12.04
Solyc01g098960.1.1	Tomato	golgi	13.86	11.71
Solyc04g078990.2.1	Tomato	golgi	14.07	11.46

Protein Annotations

Gene3D:3.90.550.10	MapMan:35.1	InterPro:Alpha_mannosyltransferase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
InterPro:IPR029044	UniProt:K4CNM4	InterPro:Nucleotide-diphossugar_trans	PFAM:PF11051	PANTHER:PTHR11183	PANTHER:PTHR11183:SF93
SUPFAM:SSF53448	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc08g078650.2	EnsemblPlants:Solyc08g078650.2.1	TMHMM:TMhelix	UniParc:UPI000276ACE0
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:62408642..62414780

Molecular Weight (calculated)

53147.6 Da

IEP (calculated)

8.778

GRAVY (calculated)

0.342

Length

469 amino acids

Sequence
(BLAST)

001: MGKLKLLISI LIFVLTAMVA GVPATPASKG VHRNAYATMM YMGTPRDYEF YVATRVMLRS LSRLGVDADL VVIASLDVPL HWVRTLEQED GAKVVRVENL
101: NNPYKGQSNF NLRFKLTMNK LYAWSLTDYE RVIMLDADNL FLQKTDELFQ CGQFCAVFIN PCMFHTGLFV LQPSTIVFKD MLHQLKVGMD NADGADQGFI
201: GAYFPDLLDQ PMFHPSLNGT KLQGNYRLPL GYQMDASYYY LRLHWSVPCG PNSVITFPGA PWLKPWYWWS WPVLPLGIEW HEQRLQTLGY DAERPLVLIQ
301: SVLYFGIIVM TRVARPNLSK LCYRRENTKS IFLIRSGQKL IALWSIVAAY IIPFFLIPHT VHPLIGWGLY LLGSFALSCI AMNTFLLPML PVLVPWLGIF
401: GVLLVMAYPW YSDGIVRALA VFAYAFCASP VAWTALVKIM SCLNVSLERE GFLPRLSESA APAGFNKLY

Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)

001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY

Arabidopsis Description

PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.