Factsheet for Solyc06g060710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030982	Potato	plasma membrane	98.18	81.29
Solyc08g078650.2.1	Tomato	plasma membrane	78.44	64.39
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	71.95	64.27
GSMUA_Achr11P...	Banana	cytosol	71.17	63.57
GSMUA_Achr5P20900_001	Banana	plasma membrane	69.09	61.72
OQU82100	Sorghum	plasma membrane	68.57	61.68
GSMUA_Achr5P15460_001	Banana	cytosol	67.53	60.32
GSMUA_Achr5P13360_001	Banana	cytosol	66.75	59.63
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	68.83	59.55
GSMUA_Achr1P01490_001	Banana	cytosol	65.97	58.93
HORVU2Hr1G097240.1	Barley	cytosol, mitochondrion, plasma membrane	67.01	58.5
Zm00001d002725_P001	Maize	plasma membrane	68.05	55.86
TraesCS2A01G412200.1	Wheat	plasma membrane	67.53	55.2
TraesCS2B01G430800.1	Wheat	plasma membrane	67.27	55.11
TraesCS2D01G409400.1	Wheat	plasma membrane	67.53	54.97
HORVU1Hr1G054100.7	Barley	mitochondrion	62.6	53.67
OQU92160	Sorghum	golgi, mitochondrion	64.16	50.82
Zm00001d047104_P001	Maize	golgi, mitochondrion	64.16	50.61
TraesCS1D01G214700.1	Wheat	golgi	62.86	49.59
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	63.12	49.49
Zm00001d029920_P001	Maize	mitochondrion	64.16	48.62
Os10t0555100-01	Rice	golgi, plasma membrane	61.82	48.37
Zm00001d026165_P003	Maize	plasma membrane	58.18	46.86
TraesCS1B01G225300.1	Wheat	golgi	61.56	45.75
Solyc04g009920.2.1	Tomato	golgi	20.78	15.01
Solyc05g055040.2.1	Tomato	plasma membrane	19.74	14.26
Solyc11g005760.1.1	Tomato	cytosol	15.58	10.54
Solyc04g064790.2.1	Tomato	golgi	16.88	10.03
Solyc04g078980.2.1	Tomato	golgi	14.55	9.93
Solyc01g098970.1.1	Tomato	golgi	14.03	9.78
Solyc01g098960.1.1	Tomato	golgi	13.25	9.19
Solyc04g078990.2.1	Tomato	golgi	13.51	9.03

Protein Annotations

EnsemblPlants:Solyc06g060710.2.1	EnsemblPlantsGene:Solyc06g060710.2	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF93	SEG:seg	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI0002766383	UniProt:K4C6Q1	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6:+:38728799..38733503

Molecular Weight (calculated)

43706.7 Da

IEP (calculated)

8.092

GRAVY (calculated)

0.297

Length

385 amino acids

Sequence
(BLAST)

001: MIHLEQEDGA KVVRVKNLNN PYCINPNWRF KLTLNKLYAW SLVDYDRVVM LDADNLFLQK TDELFQCGQF CAVFINPCIF HTGLFVLQPS KMVFNDMIHE
101: IEIGRENQDG ADQGFIGGHF PDLLDRPMFH PTLNGTQLQG SYRLPLGYQM DASYYYLKLH WSVPCGPNSV ITFPGAPWLK PWYWWSWPVL PLGIQWHEQR
201: RLTVGYGAEM IAVLIQSIFY LGIIAVTRLA RPNLSKLCYR HDDSKSALLL RTGLKLIAIW SILAAYTVPF FVIPCTVHPL VGWSLYLLGS FSLSCITVNA
301: FLLPMLPVLV PWVGILGALL VMAYPWYNDG VVRAMAVFTY AFCASPALWM ALVKIKCSLH VSLEREGFLP KISESTAPAG SNKLY

Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)

001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY

Arabidopsis Description

PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.