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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400020678 Potato golgi 96.1 96.1
Solyc04g078990.2.1 Tomato golgi 72.52 71.01
VIT_18s0001g10580.t01 Wine grape golgi 65.6 62.71
KRH05688 Soybean golgi 63.12 60.14
KRH15352 Soybean golgi 63.3 60.1
KRH61283 Soybean golgi 61.52 58.32
Bra011433.1-P Field mustard golgi 60.11 57.46
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 59.22 56.42
Bra034558.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 59.04 56.25
CDX75345 Canola golgi, plastid 59.75 55.89
CDX68968 Canola golgi 59.57 55.45
AT4G33330.2 Thale cress endoplasmic reticulum, golgi, plastid 58.33 52.56
TraesCS4B01G301200.1 Wheat golgi 50.89 48.4
TraesCS4D01G299500.1 Wheat golgi 50.71 48.07
TraesCS4A01G004100.1 Wheat golgi 50.18 47.8
Zm00001d027938_P001 Maize plasma membrane 50.0 47.55
GSMUA_Achr3P01740_001 Banana endoplasmic reticulum, golgi 45.39 46.89
GSMUA_Achr6P10110_001 Banana endoplasmic reticulum 43.62 46.86
EER95378 Sorghum golgi, plastid 50.18 46.78
Os03t0184300-02 Rice golgi 50.71 46.58
GSMUA_Achr2P22380_001 Banana extracellular, golgi, plastid 45.92 43.75
Solyc01g098960.1.1 Tomato golgi 42.38 43.06
Solyc11g005760.1.1 Tomato cytosol 42.73 42.35
Solyc01g098970.1.1 Tomato golgi 39.18 40.04
CDY28291 Canola nucleus 15.96 38.96
Solyc04g064790.2.1 Tomato golgi 42.73 37.19
CDY28292 Canola golgi 45.74 34.91
CDX99330 Canola cytosol 7.8 30.56
Solyc05g055040.2.1 Tomato plasma membrane 15.78 16.7
Solyc04g009920.2.1 Tomato golgi 14.89 15.76
Solyc08g078650.2.1 Tomato plasma membrane 12.94 15.56
Solyc06g060710.2.1 Tomato cytosol 9.93 14.55
Protein Annotations
MapMan:21.2.2.1.2.1Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009834GO:GO:0009987GO:GO:0015020GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016757GO:GO:0045492InterPro:GUXInterPro:Glyco_trans_8InterPro:IPR029044
UniProt:K4BUY2InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183PANTHER:PTHR11183:SF44SUPFAM:SSF53448
EnsemblPlantsGene:Solyc04g078980.2EnsemblPlants:Solyc04g078980.2.1TMHMM:TMhelixUniParc:UPI0002766DFESEG:seg:
Description
Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4BUY2]
Coordinates
chr4:-:63602235..63605249
Molecular Weight (calculated)
66225.5 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.396
Length
564 amino acids
Sequence
(BLAST)
001: MKSLPSKALI IKINLVFLVC FLIAYAALLH WQLSSLYHEY SKSTTRCTSC ECHHKVEEDP IFVNGTNAIL KKMVKHKKPS FVKEIMGRGM KIGMVNMEDE
101: DVSEWRIHGQ IIKVQFKKVS ELLEWDDLFP GQIDEELEEM DRRQTCPEIP MPHFYGYNNM DIIVVKLPCN YPQEGWKRDV FRLQVHLVAA NLAVNRKKGK
201: NGKMKLIFLS KCMPMMEIFR CNELKKREGD WWYYEPNMAK LAQKVSLPIG SCKLALTLRE KGTKKEYDIS NVQSREAYAT VLHSSGKYVC GAITLAQSLL
301: RTGTRRDLVL LLDDTIPQPK RDALVKAGWK LRLIQRIRNP RADKNSYNKY NYSKFRLWQL IDYEKVVFID ADIIVLRNID ILFKFPQLSA TGNDGSIFNS
401: GVMVIEPSNC TFNMLMQHTK DIISYNGGDQ GFLNEIFVWW HRLPRRVNFF KNFENLNEVS AKNQLFEADP PQLYAVHYLG LKPWMCYRDY DCNWDVSYLR
501: VYASDIAHRT WWKIHDTMDE NLQKFCGLSK QRKIELYFSR KEAEEMGLKD EHWRINVTDP RRLN
Best Arabidopsis Sequence Match ( AT4G33330.1 )
(BLAST)
001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR RSYLIG
Arabidopsis Description
PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.