CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15352	Soybean	golgi	93.92	93.6
KRH61283	Soybean	golgi	73.48	73.11
VIT_18s0001g10580.t01	Wine grape	golgi	68.41	68.64
Solyc04g078990.2.1	Tomato	golgi	65.37	67.19
PGSC0003DMT400020680	Potato	golgi	65.54	67.01
Bra011433.1-P	Field mustard	golgi	65.2	65.42
CDX75345	Canola	golgi, plastid	65.2	64.01
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	63.51	63.51
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	63.51	63.51
Solyc04g078980.2.1	Tomato	golgi	60.14	63.12
PGSC0003DMT400020678	Potato	golgi	59.46	62.41
CDX68968	Canola	golgi	63.85	62.38
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	63.85	60.38
TraesCS4A01G004100.1	Wheat	golgi	52.87	52.87
TraesCS4B01G301200.1	Wheat	golgi	52.7	52.61
TraesCS4D01G299500.1	Wheat	golgi	52.87	52.6
Zm00001d027938_P001	Maize	plasma membrane	52.03	51.94
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	45.95	51.81
EER95378	Sorghum	golgi, plastid	52.36	51.24
Os03t0184300-02	Rice	golgi	52.36	50.49
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	45.1	48.9
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	47.13	47.13
CDY28291	Canola	nucleus	17.23	44.16
KRH68559	Soybean	cytosol	26.18	43.66
KRG96838	Soybean	golgi	39.86	42.68
KRH33949	Soybean	plastid	38.51	39.79
KRH15962	Soybean	golgi	39.36	39.42
CDY28292	Canola	golgi	49.16	39.38
KRH53878	Soybean	cytosol, golgi, mitochondrion	41.55	38.5
KRH64070	Soybean	plastid	41.39	38.34
KRH59555	Soybean	cytosol	40.88	37.81
KRH72868	Soybean	golgi	40.54	37.27
KRH57436	Soybean	cytosol	35.3	35.19
CDX99330	Canola	cytosol	8.11	33.33
KRH43404	Soybean	cytosol	9.8	20.71
KRG97021	Soybean	endoplasmic reticulum	15.37	16.52
KRH68773	Soybean	endoplasmic reticulum	15.2	16.33
KRG92718	Soybean	endoplasmic reticulum	14.53	15.9
KRH04125	Soybean	plasma membrane	11.82	14.71
KRH57402	Soybean	extracellular, golgi, plasma membrane	11.66	14.47
KRH34122	Soybean	plasma membrane	12.16	13.95
KRH28078	Soybean	plasma membrane	10.81	13.56
KRH77365	Soybean	cytosol, peroxisome	6.76	12.12

Protein Annotations

EntrezGene:100795248	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EMBL:ACUP02010772	EnsemblPlantsGene:GLYMA_17G242500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492
InterPro:GUX	InterPro:Glyco_trans_8	UniProt:I1MXP3	InterPro:IPR029044	EnsemblPlants:KRH05688	ProteinID:KRH05688
ProteinID:KRH05688.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI000233E664	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:39824928..39830495

Molecular Weight (calculated)

69247.4 Da

IEP (calculated)

8.549

GRAVY (calculated)

-0.389

Length

592 amino acids

Sequence
(BLAST)

001: MDVWSLQKLV KTAPSKALVI RINLVCLAIF LVVYATFLLR PSSSVYFENA ASLVRCSLRE CHHKGEKSIK MKAVLERNED RRAKQNASKI EVPSFFGEMG
101: KGMKIGMVNM QEDDVSEWST LGETSHVYFE KVSQFFNWTD LFPEWIDEEE ETDVPSCPEI PMPEFTAYEG MDVIVAKLPC NYPKEGWGRN VFRLQVHLIV
201: ANLAVKKGKR DWNWKTKVVL WSKCRPMLEL FRCNDLVKQE NEWWYYEVDA MRLEQKVSLP VGSCNLALPL WEQGIDKVYD TWNLEQSVKS EARSKREAYA
301: TVLHSSEGYV CGAITLAQTL LQTGTKRDLI LLLDTSISVA KRRSLELSGW KIRLITRIRN PRAENGTYNE YNYSKFRLWQ LTDYERVIFI DADIIVLRNL
401: DILFHFPQMS ATGNDQSIFN SGIMVLEPSN CTFHVLMSRR HDVISYNGGD QGFLNEIFMW WHRLPRRVNY LKNFWANTTI EAGRKNAMFG AEPPKLYAIH
501: YLGLKPWHCY RDYDCNWDVE DQRVYASDVA HRRWWKVHDA MDENLQKLCR LTRQRRMELN WERRKAGKLG LPDMHWKINV TDPRRAGSML IG

Best Arabidopsis Sequence Match ( AT4G33330.4 )
(BLAST)

001: MKDKCLSFRN EMTIMTMIMK MAPSKSALIR FNLVLLGFSF LLYTAIFFHP SSSVYFSSGA SFVGCSFRDC TPKVVRGVKM QELVEENEIN KKDLLTASNQ
101: TKLEAPSFME EILTRGLGKT KIGMVNMEEC DLTNWKRYGE TVHIHFERVS KLFKWQDLFP EWIDEEEETE VPTCPEIPMP DFESLEKLDL VVVKLPCNYP
201: EEGWRREVLR LQVNLVAANL AAKKGKTDWR WKSKVLFWSK CQPMIEIFRC DDLEKREADW WLYRPEVVRL QQRLSLPVGS CNLALPLWAP QGVDKVYDLT
301: KIEAETKRPK REAYVTVLHS SESYVCGAIT LAQSLLQTNT KRDLILLHDD SISITKLRAL AAAGWKLRRI IRIRNPLAEK DSYNEYNYSK FRLWQLTDYD
401: KVIFIDADII VLRNLDLLFH FPQMSATGND VWIYNSGIMV IEPSNCTFTT IMSQRSEIVS YNGGDQGYLN EIFVWWHRLP RRVNFLKNFW SNTTKERNIK
501: NNLFAAEPPQ VYAVHYLGWK PWLCYRDYDC NYDVDEQLVY ASDAAHVRWW KVHDSMDDAL QKFCRLTKKR RTEINWERRK ARLRGSTDYH WKINVTDPRR
601: RRSYLIG

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.