Factsheet for VIT_18s0001g10580.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g078990.2.1	Tomato	golgi	68.64	70.31
PGSC0003DMT400020680	Potato	golgi	68.31	69.6
KRH15352	Soybean	golgi	69.15	68.69
KRH05688	Soybean	golgi	68.64	68.41
Solyc04g078980.2.1	Tomato	golgi	62.71	65.6
PGSC0003DMT400020678	Potato	golgi	62.71	65.6
KRH61283	Soybean	golgi	65.59	65.04
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	62.88	62.67
Bra011433.1-P	Field mustard	golgi	62.54	62.54
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	62.71	62.5
CDX75345	Canola	golgi, plastid	62.71	61.36
CDX68968	Canola	golgi	62.03	60.4
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	62.37	58.79
TraesCS4B01G301200.1	Wheat	golgi	55.59	55.31
TraesCS4A01G004100.1	Wheat	golgi	54.58	54.39
TraesCS4D01G299500.1	Wheat	golgi	54.75	54.29
Zm00001d027938_P001	Maize	plasma membrane	53.56	53.29
Os03t0184300-02	Rice	golgi	55.08	52.93
EER95378	Sorghum	golgi, plastid	54.07	52.73
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	45.25	50.86
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	46.95	50.73
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	47.63	47.47
VIT_14s0128g00420.t01	Wine grape	golgi	42.2	45.6
VIT_04s0044g00990.t01	Wine grape	golgi	43.56	40.41
CDY28292	Canola	golgi	50.17	40.05
VIT_18s0001g15580.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	42.54	39.1
CDY28291	Canola	nucleus	15.25	38.96
CDX99330	Canola	cytosol	8.47	34.72
VIT_14s0036g00430.t01	Wine grape	golgi	14.07	15.2
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	8.31	12.83

Protein Annotations

EntrezGene:100266116	wikigene:100266116	MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	EMBL:AM468354	ProteinID:CAN77198
ProteinID:CAN77198.1	ProteinID:CBI19526	ProteinID:CBI19526.3	UniProt:E0CP69	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009834	GO:GO:0009987
GO:GO:0015020	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0045492
InterPro:GUX	InterPro:Glyco_trans_8	InterPro:IPR029044	EntrezGene:LOC100266116	wikigene:LOC100266116	InterPro:Nucleotide-diphossugar_trans
PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00015C7917
ArrayExpress:VIT_18s0001g10580	EnsemblPlantsGene:VIT_18s0001g10580	EnsemblPlants:VIT_18s0001g10580.t01	RefSeq:XP_002282762	RefSeq:XP_002282762.1	SEG:seg

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:E0CP69]

Coordinates

chr18:-:8883524..8885782

Molecular Weight (calculated)

68730.2 Da

IEP (calculated)

8.823

GRAVY (calculated)

-0.293

Length

590 amino acids

Sequence
(BLAST)

001: MVLEGVSVPK MLIKVTPSKA LVLKINLVFL AFFVVVYAAL LLRPSLSVYH ENAAALVRCT LRECNHKAEK GVKMKAALEE NQADQAMAAK RKMVKSEKPS
101: FLNEMRKGMR IGMVNMDDED VGEWKVHGEI VHVHFQQVSE LFNWTDLFPE WIDEEEEKEG TMCPEIPMPD FRRYWDMDLI VAKLPCKYPE EGWRRDVFRL
201: QVHLIAANLA VKKGRRDWNW RTKLVFLSRC RPMMELFRCD DLVRQEGDWW FYQPSVARLE QKVSLPVGSC KLALPLWAKG VDKVFDLSKI KADTRSVKRE
301: AYATVLHSSD TYVCGAITLA QSLLRTGTKR DLLLLLDSSI PVSKRDALAA AGWQIRLIKR IRNPKAEKDS YNEYNYSKFR LWQLTEYDKI IFIDADIIVL
401: RNLDLLFHFP QMSATGNDGS IFNSGIMTIE PSNCTFRILM NHIKDIVSYN GGDQGFLNEV FVWWHRFPKR VNFLKNFWSN STVEAGVKNQ LFGSDPPKLY
501: SIHYLGLKPW LCYRDYDCNW DIENQLVYAS DVAHHRWWKL HDAMDESLQT FCGLSERRKI ELAWDRKVAG ERGLRNQHWS INVTDPRRFL

Best Arabidopsis Sequence Match ( AT4G33330.2 )
(BLAST)

001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR PNINFRMVSA
601: QLEKCLAFDE KGIKVINLAE EMENTL

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.