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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:endoplasmic reticulum, nucleus
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034558.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 58.87 22.97
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 58.87 22.97
CDX68968 Canola golgi 55.84 21.29
CDX75345 Canola golgi, plastid 54.55 20.9
AT4G33330.2 Thale cress endoplasmic reticulum, golgi, plastid 50.22 18.53
KRH05688 Soybean golgi 44.16 17.23
KRH15352 Soybean golgi 44.16 17.17
KRH61283 Soybean golgi 42.86 16.64
PGSC0003DMT400020678 Potato golgi 39.39 16.13
Solyc04g078980.2.1 Tomato golgi 38.96 15.96
Solyc04g078990.2.1 Tomato golgi 38.1 15.28
VIT_18s0001g10580.t01 Wine grape golgi 38.96 15.25
PGSC0003DMT400020680 Potato golgi 38.1 15.2
Zm00001d027938_P001 Maize plasma membrane 35.06 13.66
TraesCS4A01G004100.1 Wheat golgi 34.2 13.34
TraesCS4B01G301200.1 Wheat golgi 34.2 13.32
TraesCS4D01G299500.1 Wheat golgi 34.2 13.28
EER95378 Sorghum golgi, plastid 33.77 12.89
Os03t0184300-02 Rice golgi 33.77 12.7
CDY38364 Canola extracellular, golgi 30.3 12.61
GSMUA_Achr6P10110_001 Banana endoplasmic reticulum 27.27 12.0
CDY32144 Canola endoplasmic reticulum, golgi 27.71 11.43
CDY18535 Canola plastid 32.47 11.36
CDY53768 Canola plastid 32.47 11.36
CDX95254 Canola golgi 27.27 11.31
CDY41730 Canola endoplasmic reticulum, golgi 27.27 11.31
CDY06343 Canola golgi 26.84 11.29
GSMUA_Achr3P01740_001 Banana endoplasmic reticulum, golgi 25.97 10.99
CDY04633 Canola golgi, mitochondrion, peroxisome 30.3 10.95
CDY22652 Canola golgi 26.41 10.76
CDY32143 Canola golgi 26.41 10.74
GSMUA_Achr2P22380_001 Banana extracellular, golgi, plastid 27.27 10.64
CDY31118 Canola golgi 25.97 10.56
CDX96589 Canola golgi, peroxisome, plasma membrane 23.81 8.9
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 23.38 8.75
CDX92257 Canola plastid 23.81 8.74
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 30.3 6.76
CDY58112 Canola plasma membrane 12.12 5.28
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 9.52 5.15
CDY32093 Canola cytosol 9.09 4.88
CDY02625 Canola plasma membrane 11.26 4.88
CDX70822 Canola plasma membrane 10.82 4.7
CDX84174 Canola plasma membrane 9.96 4.66
CDY40445 Canola plasma membrane 9.96 4.66
CDY29996 Canola extracellular, plasma membrane 10.82 4.58
CDY21129 Canola extracellular, golgi, plasma membrane 10.82 4.58
CDX88935 Canola plasma membrane 10.39 4.49
CDY40528 Canola plasma membrane 10.39 4.32
CDY13574 Canola plastid 6.93 3.46
CDY28292 Canola golgi 9.96 3.11
CDX99330 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-MapMan:21.2.2.1.2.1Gene3D:3.90.550.10GO:A0A078GS06
UniProt:A0A078GS06EnsemblPlants:CDY28291ProteinID:CDY28291ProteinID:CDY28291.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009834GO:GO:0009987GO:GO:0015020
GO:GO:0016740GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00040036001InterPro:GUXInterPro:IPR029044InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR11183PANTHER:PTHR11183:SF44SUPFAM:SSF53448UniParc:UPI0004EE1E10SEG:seg:
Description
BnaC03g66680DBnaC03g66680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS06]
Coordinates
chrLK032217:-:163937..165563
Molecular Weight (calculated)
27438.7 Da
IEP (calculated)
9.010
GRAVY (calculated)
-0.376
Length
231 amino acids
Sequence
(BLAST)
001: MELEMTTVST VSPNNMLSGT VEIHLVSRII ADLVCLMDCI FTSSFSMSSS VLVFTNDFQT RSLGSPLIGS CTDFSMFLGA SVLGFQVKFV YGYLNEIFVW
101: WHRLPRRVNF LKNFWSNTTN ERNIKNSLFT AEPPQLYAVH YLGWKPWLCY RDYDCNFDVE QHVYASDTAH DRWWKVHDAM DEDLQRFCRL TKKRRTELNW
201: ERRRSRRRGS TDFHWRINVT DPRRRRSYLI G
Best Arabidopsis Sequence Match ( AT1G77130.1 )
(BLAST)
001: MIPSSSPMES RHRLSFSNEK TSRRRFQRIE KGVKFNTLKL VLICIMLGAL FTIYRFRYPP LQIPEIPTSF GLTTDPRYVA TAEINWNHMS NLVEKHVFGR
101: SEYQGIGLIN LNDNEIDRFK EVTKSDCDHV ALHLDYAAKN ITWESLYPEW IDEVEEFEVP TCPSLPLIQI PGKPRIDLVI AKLPCDKSGK WSRDVARLHL
201: QLAAARVAAS SKGLHNVHVI LVSDCFPIPN LFTGQELVAR QGNIWLYKPN LHQLRQKLQL PVGSCELSVP LQAKDNFYSA GAKKEAYATI LHSAQFYVCG
301: AIAAAQSIRM SGSTRDLVIL VDETISEYHK SGLVAAGWKI QMFQRIRNPN AVPNAYNEWN YSKFRLWQLT EYSKIIFIDA DMLILRNIDF LFEFPEISAT
401: GNNATLFNSG LMVVEPSNST FQLLMDNINE VVSYNGGDQG YLNEIFTWWH RIPKHMNFLK HFWEGDEPEI KKMKTSLFGA DPPILYVLHY LGYNKPWLCF
501: RDYDCNWNVD IFQEFASDEA HKTWWRVHDA MPENLHKFCL LRSKQKAQLE WDRRQAEKGN YKDGHWKIKI KDKRLKTCFE DFCFWESMLW HWGETNSTNN
601: SSTTTTSSPP HKTALPSL
Arabidopsis Description
GUX3Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WC33]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.