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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022342.1-P Field mustard plastid 97.3 97.14
CDY53768 Canola plastid 90.78 86.52
CDY18535 Canola plastid 90.46 86.21
AT3G18660.2 Thale cress plastid 89.83 85.74
CDX99330 Canola cytosol 15.1 65.97
Os05t0426400-01 Rice mitochondrion 37.36 65.64
HORVU0Hr1G000670.2 Barley cytosol 41.49 65.58
Solyc11g005760.1.1 Tomato cytosol 58.98 65.2
KRH53878 Soybean cytosol, golgi, mitochondrion 64.86 63.85
VIT_04s0044g00990.t01 Wine grape golgi 64.55 63.84
KRH64070 Soybean plastid 64.23 63.22
KRH59555 Soybean cytosol 62.48 61.41
CDX96589 Canola golgi, peroxisome, plasma membrane 57.07 58.09
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 56.76 57.86
CDY04633 Canola golgi, mitochondrion, peroxisome 58.03 57.12
HORVU3Hr1G091400.3 Barley golgi 56.6 56.24
Os01t0880200-01 Rice cytosol, golgi, peroxisome 56.76 56.22
TraesCS3D01G404100.1 Wheat golgi 56.6 56.15
TraesCS3A01G409200.2 Wheat golgi 56.44 55.99
TraesCS3B01G442700.1 Wheat golgi 56.28 55.84
EES01856 Sorghum golgi 55.96 55.61
EES19558 Sorghum golgi 55.64 55.47
Zm00001d038229_P001 Maize plasma membrane 55.48 55.22
Zm00001d042627_P005 Maize golgi 55.8 55.02
HORVU1Hr1G065560.2 Barley golgi 54.85 54.94
TraesCS1B01G277500.1 Wheat cytosol, golgi, peroxisome 54.85 54.76
KRH57436 Soybean cytosol 51.67 54.71
TraesCS1A01G266600.2 Wheat cytosol, golgi, peroxisome 54.85 54.68
TraesCS1D01G266700.2 Wheat cytosol, golgi, peroxisome 54.69 54.6
Zm00001d012224_P001 Maize golgi 55.64 54.6
HORVU0Hr1G000650.2 Barley golgi 54.69 54.52
CDY13574 Canola plastid 39.11 53.13
GSMUA_Achr3P16530_001 Banana plastid 48.97 52.92
CDY38364 Canola extracellular, golgi 46.42 52.61
GSMUA_Achr7P23420_001 Banana cytosol, plastid 42.61 51.24
GSMUA_Achr6P18570_001 Banana plastid 42.77 51.24
GSMUA_Achr4P16410_001 Banana endoplasmic reticulum, golgi 44.99 50.27
GSMUA_Achr7P03050_001 Banana endoplasmic reticulum 45.95 49.91
GSMUA_Achr8P29450_001 Banana plasma membrane 48.17 48.87
GSMUA_Achr8P32660_001 Banana plastid 52.78 48.68
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 44.83 48.62
GSMUA_Achr10P... Banana golgi 40.7 46.89
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 36.57 38.85
CDX75345 Canola golgi, plastid 37.04 38.64
CDX68968 Canola golgi 37.04 38.45
CDY41730 Canola endoplasmic reticulum, golgi 32.75 36.98
CDX95254 Canola golgi 32.59 36.8
CDY32144 Canola endoplasmic reticulum, golgi 32.43 36.43
CDY22652 Canola golgi 31.8 35.27
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 57.55 34.98
CDY32143 Canola golgi 31.32 34.68
CDY31118 Canola golgi 31.16 34.51
CDY06343 Canola golgi 30.05 34.43
CDY28292 Canola golgi 29.57 25.17
CDY28291 Canola nucleus 8.74 23.81
CDY58112 Canola plasma membrane 13.67 16.23
CDY02625 Canola plasma membrane 13.2 15.57
CDX88935 Canola plasma membrane 12.72 14.98
CDX70822 Canola plasma membrane 12.56 14.85
CDY29996 Canola extracellular, plasma membrane 12.72 14.65
CDY21129 Canola extracellular, golgi, plasma membrane 12.4 14.29
CDY40445 Canola plasma membrane 10.97 13.97
CDX84174 Canola plasma membrane 10.65 13.56
CDY32093 Canola cytosol 9.06 13.26
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 8.43 12.41
CDY40528 Canola plasma membrane 7.47 8.47
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-MapMan:21.2.2.1.2.1Gene3D:3.90.550.10GO:A0A078DTN1
EnsemblPlants:CDX92257ProteinID:CDX92257ProteinID:CDX92257.1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009834GO:GO:0009987GO:GO:0015020GO:GO:0016740
GO:GO:0016757GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00153975001InterPro:GUXInterPro:Glyco_trans_8InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPFAM:PF01501PANTHER:PTHR11183PANTHER:PTHR11183:SF45SUPFAM:SSF53448UniParc:UPI0004EE2273
SEG:seg:::::
Description
BnaA05g21500D
Coordinates
chrLK031871:-:1110565..1114164
Molecular Weight (calculated)
72526.7 Da
IEP (calculated)
8.333
GRAVY (calculated)
-0.405
Length
629 amino acids
Sequence
(BLAST)
001: MANPPAAVVA TSATGDPRRR LSASISEAIC KRRFRRNSKS GGRSDMVKPF NILNFPTQDK NSSCCCSVFQ IVKVLLCILL SATLFTIIYS PEAYHSLSHS
101: SRWIWRRQDP RYVSDLEISW DDVTKTIASV QEGRTIGVLN FDTKEIRRWR DVAMTKDNED DENVVELDLE HAEKNVTWDA LYPEWIDEEQ EKDVPVCPNL
201: PKIKVPTRRL DLVVVKLPCR NEGNWSRDVA RLHLQMAAAT VAASAKGFFG GHVMFVSRCF PMPNLFRCKD LVSRRGDVWL YKPNLDTLRD KLQLPIGSCE
301: LSLPFGIKER PSLGNPKREA YATILHSAHV YVCGAIAAAQ SIRQSGSTRD LVIVVDENIS GYHRSGLEAA GWQIRTIQRI RNPKAEKDAY NEWNYSKFRL
401: WQLTDYDKII FIDADLLILR NIDFLFSMPE ISATGNNGTL FNSGVMVIEP CNCTFQLLME HINEIESYNG GDQGYLNEVF TWWHRIPKHM NFLKHFWVGD
501: EDDVKRKKTE LFGAEPPILY FATDIAHRRW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG HWKIRVKDKR FKICIDKLCN WKSMLRHWGE
601: SNWTDYESFV PTPPAITAVR KTSLPGHNL
Best Arabidopsis Sequence Match ( AT3G18660.2 )
(BLAST)
001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRWIWRR QDPRYFSDLD INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT WDALYPEWID EEQETEVPVC
201: PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG
301: SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK
401: FRLWQLTDYD KIIFIDADLL ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN EVFTWWHRIP KHMNFLKHFW
501: IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG
601: HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL
Arabidopsis Description
GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.